Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq7552 356 2e-93 seq7521 170 2e-37 seq7535 143 3e-29 seq7517 129 6e-25 >seq7552 Length=2500597 Score = 356 bits (394), Expect = 2e-93 Identities = 1190/1828 (65%), Gaps = 44/1828 (2%) Strand=Plus/Plus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || |||||||| |||| |||||||||||| ||||| | ||| ||| ||| Sbjct 1134920 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAA 1134979 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || |||||||||| | | || | |||||||| || | || | |||||| Sbjct 1134980 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1135039 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-ATTTC 144918 ||||| || || ||| || || |||||||| | || |||||| || || || Sbjct 1135040 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGC-ACGTTTTCACCGAGATCTC 1135098 Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAAT-GCCGTCAATCGCCTGAATCG 144977 ||| | || ||||||| | ||| | | ||| || |||| ||||| || |||| Sbjct 1135099 CCATACCGTTTTGTACAGATCGCGAATTTCCTGCGGTATAGCCG-CAATCTTTTGGATCG 1135157 Query 144978 ACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCA 145037 | || |||| | | || ||||| ||| ||| |||| | ||| ||| Sbjct 1135158 ATCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCA 1135217 Query 145038 AGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAAT 145097 | || | | | | || || || ||||| |||||||| | || ||| || | | Sbjct 1135218 AATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGT 1135277 Query 145098 ACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTG 145157 | ||||| |||||| | || || || || || || ||||| || ||||| || || | | Sbjct 1135278 AAACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAG 1135337 Query 145158 CGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCT 145217 | || ||||| |||| || | |||||||| | ||||||||| ||| | ||||| Sbjct 1135338 CCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCT 1135397 Query 145218 TTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAA 145277 | | | |||| | ||| || ||||| | || |||||| ||||||||||| | Sbjct 1135398 TCAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGA 1135457 Query 145278 TGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTA---ACTGCCCCAAGTTTTGGCGA 145334 |||||| ||| | || ||||| | | | ||| || | | || ||| | Sbjct 1135458 TGCCCTTGCTCACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGC---GGCCA 1135514 Query 145335 GCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCA 145394 ||| || ||||| ||||| |||||| | || || || ||| |||||| || ||| Sbjct 1135515 ACTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCT 1135574 Query 145395 GCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 || || ||||| |||||||| ||||| ||| | || |||||||| | |||| Sbjct 1135575 TTTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCT 1135634 Query 145455 GTATTCCCACGCCGATGGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGAT 145509 | | || | ||||| |||| || ||| ||| || | |||| || | || Sbjct 1135635 GCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTC--CGGCACG-- 1135690 Query 145510 AGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTG 145569 ||||| ||| || || ||||| |||| || ||| ||| ||| | | | Sbjct 1135691 -GGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTC 1135749 Query 145570 CCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGAT 145629 | || |||| |||||||| || | | ||| ||| | | || | |||||| Sbjct 1135750 CTTCAGCTTTGCAAAGTCATAC---GTTTTGTCTTGCTTTACAAACATGTTCAAGGCGAT 1135806 Query 145630 CGACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGC 145688 ||| |||| ||| || || || ||| || || || ||| | ||| || || | || Sbjct 1135807 CGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGA-GTACTCTACAATTTCAGTGC 1135865 Query 145689 ACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGT 145748 |||| ||| |||||||||||| || | ||| ||||| |||||||| | ||||| || | Sbjct 1135866 ACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCAT 1135925 Query 145749 CCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTG 145806 ||||||| |||||||||||| |||| || |||||||||| || | ||| |||| Sbjct 1135926 CCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAAC--CA 1135983 Query 145807 CAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAG 145866 || |||||||| ||||||| || |||| ||||||| ||||| | |||| || Sbjct 1135984 CAGATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAG 1136043 Query 145867 CTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAG 145926 || ||| ||| | || || || || || |||||||| | || || |||||||| Sbjct 1136044 CTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAG 1136103 Query 145927 CGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 ||| | |||| || | || |||| ||| |||| || || | ||| || ||||| Sbjct 1136104 ACTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTA 1136163 Query 145987 CATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT 146046 | || ||| || || | ||||| || ||||| ||||| || || | ||| Sbjct 1136164 AAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAG-AAACT 1136222 Query 146047 -ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGC 146102 | || || | |||||||| || | ||||| ||||| ||||| || |||| Sbjct 1136223 CGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGC 1136282 Query 146103 CACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGC 146162 ||||||| || |||| ||| || | ||||| ||||||||| ||| ||| | | ||| Sbjct 1136283 CACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGT 1136342 Query 146163 TGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCA 146222 | | | ||||||||| | || || || | ||| | || || || |||| Sbjct 1136343 TCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCA 1136402 Query 146223 CGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGC 146282 |||| || ||| | |||| || || ||| || | ||||| |||||||||| Sbjct 1136403 GTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGC 1136462 Query 146283 CGTCAATGCTATCGCTTCG--AATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | |||||||||| ||||| ||| | ||| ||||| || | | ||| | | | Sbjct 1136463 CCTCAATGCTAT--CTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTG 1136520 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCC 146399 || |||||| |||| || || ||||| ||||| | |||| || || Sbjct 1136521 AGTGGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGG-ACAGCAGAT 1136579 Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGA 146459 || || ||||| || | | ||||| |||||||| ||||| | ||| |||||||| | Sbjct 1136580 TGTAGGTCTCGATTGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCA 1136639 Query 146460 GCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAA--ATAGCCGTTCTC 146517 ||||||| ||||| ||||| | | || | ||||| | ||| || ||| || Sbjct 1136640 GCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGT--TC 1136697 Query 146518 CAGGGTTTTGTATCCGAAAAATTTGTAC 146545 || |||||| | |||||| | |||||| Sbjct 1136698 CAAGGTTTTAAAGCCGAAATAGTTGTAC 1136725 >seq7521 Length=12184106 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||||| | ||| | |||||||||||| || |||||||| ||| | Sbjct 8321344 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 8321285 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || ||| Sbjct 8321284 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 8321225 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| ||| ||| | | ||| | ||||| | || ||||| Sbjct 8321224 ATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 8321165 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 8321164 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 8321118 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||| | ||||| ||||| ||||||||||| ||| ||| Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||| || || || || ||||| ||||| ||| || ||| | | || Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCT 9381275 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | | ||||| || | || | ||| || ||||| || ||||| |||| Sbjct 9381276 CGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGA 9381335 Query 131225 AAATCTGCATG 131235 ||||||||||| Sbjct 9381336 AAATCTGCATG 9381346 >seq7535 Length=3646130 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| |||||||| || ||||| || || | Sbjct 876036 CCACCACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGAC 876095 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||| || || ||| Sbjct 876096 AGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGG 876155 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | ||||| | | ||| | Sbjct 876156 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACC 876215 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| |||||||| |||||||||||||| Sbjct 876216 TCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876262 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| || || | ||| | || |||||||| || ||||| || || Sbjct 875807 GCCACCACGCAGACGAAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGA 875866 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| |||||||| || ||| |||| | ||||||||| || || || Sbjct 875867 CAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGG 875926 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||| || ||||| ||| ||| ||| | | ||| | ||||| | | ||| | Sbjct 875927 GATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAAC 875986 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| |||||||| |||||||||||||| Sbjct 875987 TTCCAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876034 >seq7517 Length=11427604 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| ||| || || || || | |||||||||||| || |||||||| ||| Sbjct 2898739 GCCACCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGA 2898680 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || ||| || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct 2898679 CAAGGTACGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGG 2898620 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||| | | ||| | || || | | ||||| Sbjct 2898619 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGAC 2898560 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || || || ||||| ||||||||| Sbjct 2898559 CTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCATG 2898511 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| ||| || || || || | |||||||||||| || |||||||| ||| Sbjct 2898511 GCCACCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGA 2898452 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||| || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct 2898451 CAGAGTACGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGG 2898392 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||| | | ||| | || || | | ||||| Sbjct 2898391 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGAC 2898332 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 2898331 CTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 2898284 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 |||||||||||| || |||||||| ||| || ||| || ||| || |||||||| || Sbjct 2898937 GGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCCAGCTGCTTACC 2898878 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| ||||||||||| || ||||| || || || ||||| ||| || ||| Sbjct 2898877 GGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 2898818 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | ||| | || || | | ||||| || | || | ||| || || || || || Sbjct 2898817 CACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGT 2898758 Query 131217 TTTTACGAAAATCTGCATG 131235 || ||||| ||||||||| Sbjct 2898757 CTTCACGAAGATCTGCATG 2898739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471950724416640