Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq7535 95.1 1e-14
seq7521 84.2 2e-11
>seq7535
Length=3646130
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| || || |||||||| || ||||| ||||| | || ||| | | |||
Sbjct 875823 AGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 875882
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || || || || | || || ||||| || || || | ||||| |||||
Sbjct 875883 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 875942
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | |||||| | | | || || ||||| ||||| |||||||||
Sbjct 875943 TGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACTTCCAGGGTGATGGTC 876002
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||||||||| ||||| || |||||||||||
Sbjct 876003 TTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876034
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| || ||||||||||| || ||||| ||||| | || ||| | | |||
Sbjct 876051 AGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 876110
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || || || || | || || ||||| || || || | ||||| |||||
Sbjct 876111 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 876170
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | |||||| | | | || || ||||| || | |||||||||
Sbjct 876171 TGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCGAGGGTGATGGTC 876230
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||||||||| ||||| || |||||||||||
Sbjct 876231 TTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876262
>seq7521
Length=12184106
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | ||| |||| ||| || || |||||||| || ||||||||||||| |
Sbjct 8321344 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 8321285
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | ||||||| || ||||| || | || || ||||| || || ||
Sbjct 8321284 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 8321225
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| || || ||||| || | | |||||| | | | || || ||||||
Sbjct 8321224 ATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 8321165
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| | ||| ||||| || || || || |||||||| || |||||||| |||
Sbjct 8321164 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 8321114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405036057717790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |