Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7525 141 8e-29 >seq7525 Length=4038190 Score = 141 bits (156), Expect = 8e-29 Identities = 219/308 (71%), Gaps = 6/308 (2%) Strand=Plus/Minus Query 50979 ATCCACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAAT 51038 || |||||| || |||||||| || || | |||||||| |||| ||| | ||||| || Sbjct 440108 ATTCACGTTGAATTTACGCTTGCATCCGTCATAGTTCATGTACCGAATTTTACCAAAGAT 440049 Query 51039 TTTGCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACAT 51097 || ||| || || | | |||| ||||| | || || |||||||| ||||| || | Sbjct 440048 TTCGCGCTCCTTCCA-GCCCTGATCGTGGATGCCCGCGATCGACCACATGCAACCGACGT 439990 Query 51098 AATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCA 51157 | ||| ||||| || ||||||| ||||| ||||||| ||| | || || | | Sbjct 439989 ACCCGTTCGGATCCCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATCGCCGTCTCAA 439930 Query 51158 ATGCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGT 51217 || || | | |||||| |||| || || ||||||||||||||||||| | Sbjct 439929 GCGCTTCCTCGGGCGTTTTCGTCCACTCCAGGATCTTTTTGGCCCAGTACATGCGCAGGA 439870 Query 51218 AACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTC 51275 | ||||||||||||||||| || | | |||| || ||||||||||||| ||||| Sbjct 439869 AGCCGTGCATCTTGCCCTCCTTCACC--ATCTGCAGCTGGGCCGAGTTCCACAGATCGTC 439812 Query 51276 GTGAGTTT 51283 || |||| Sbjct 439811 ATGCGTTT 439804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433272436652615