Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq7525 141 8e-29
>seq7525
Length=4038190
Score = 141 bits (156), Expect = 8e-29
Identities = 219/308 (71%), Gaps = 6/308 (2%)
Strand=Plus/Minus
Query 50979 ATCCACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAAT 51038
|| |||||| || |||||||| || || | |||||||| |||| ||| | ||||| ||
Sbjct 440108 ATTCACGTTGAATTTACGCTTGCATCCGTCATAGTTCATGTACCGAATTTTACCAAAGAT 440049
Query 51039 TTTGCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACAT 51097
|| ||| || || | | |||| ||||| | || || |||||||| ||||| || |
Sbjct 440048 TTCGCGCTCCTTCCA-GCCCTGATCGTGGATGCCCGCGATCGACCACATGCAACCGACGT 439990
Query 51098 AATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCA 51157
| ||| ||||| || ||||||| ||||| ||||||| ||| | || || | |
Sbjct 439989 ACCCGTTCGGATCCCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATCGCCGTCTCAA 439930
Query 51158 ATGCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGT 51217
|| || | | |||||| |||| || || ||||||||||||||||||| |
Sbjct 439929 GCGCTTCCTCGGGCGTTTTCGTCCACTCCAGGATCTTTTTGGCCCAGTACATGCGCAGGA 439870
Query 51218 AACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTC 51275
| ||||||||||||||||| || | | |||| || ||||||||||||| |||||
Sbjct 439869 AGCCGTGCATCTTGCCCTCCTTCACC--ATCTGCAGCTGGGCCGAGTTCCACAGATCGTC 439812
Query 51276 GTGAGTTT 51283
|| ||||
Sbjct 439811 ATGCGTTT 439804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433272436652615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |