Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 241 1e-58
seq7521 113 4e-20
seq7535 109 5e-19
>seq7552
Length=2500597
Score = 241 bits (266), Expect = 1e-58
Identities = 951/1478 (64%), Gaps = 40/1478 (3%)
Strand=Plus/Plus
Query 128775 CGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACAT 128834
|| ||||||||| ||||| | || || | | ||||||||||| |||| |||||||||
Sbjct 1134886 CGTCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACAT 1134945
Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894
||| |||||||| || | ||||| | | || |||| |||| | | ||| |
Sbjct 1134946 GCCAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTT 1135005
Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954
|| | | ||| || || ||||| ||||| ||||| | ||| ||||| ||
Sbjct 1135006 TGGCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGC 1135065
Query 128955 AGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCAC 129014
||||| || | ||||||| || ||||| ||||||||||| || || | |
Sbjct 1135066 GGCCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAAT 1135125
Query 129015 GTGTTTTGGTATTTCTTCAATGTTCTGCA-CGCTGCCGTTGTTTGCAATAATTTTGTTTC 129073
| | ||||| | |||| || || | || | || ||||| | | ||||| |||
Sbjct 1135126 TTCCTGCGGTATAGCCGCAATCTTTTGGATCGAT-CCATTGTTGGACAGAATTTCGTTCT 1135184
Query 129074 GCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAG-TATTTGTTTATT 129132
||| | | ||| | || ||| ||||||| | | ||| | | ||| |
Sbjct 1135185 TCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCT-GCAGAAGATGATGGTTCACC 1135243
Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192
|| || || || |||| || ||||||| | ||||| ||| ||| ||||||| |||
Sbjct 1135244 ACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAAC 1135303
Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGC 129252
|||||||||||||| | ||||| ||||| | || || ||||| |||| |||
Sbjct 1135304 GATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGC 1135363
Query 129253 GAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGAT 129312
|| || || | ||||||| || | || || || | | ||||| ||||| |||
Sbjct 1135364 GAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA--GAT 1135421
Query 129313 --GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAA 129370
|| ||| | ||||||| ||||| ||||| || ||| || | ||||||
Sbjct 1135422 CCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCT 1135481
Query 129371 AGTAGGAATCGTGCACGCCGTA---AGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGC 129427
||| | |||| | || | ||| ||||| || || |||||||||| ||||
Sbjct 1135482 CGTACGTCTCGTACGGACCATCTCGAGCG---GCCAACTCACAGCTCGCTTCCAGCGCGC 1135538
Query 129428 CAAAATAAATTGTTTCGGCAAT-TTTGGTGTTCAACACTTTG-GCCTGGTCGCTTTCGTA 129485
| | || || |||||| ||| |||| || | | |||| |||| |||||||||||
Sbjct 1135539 CGTAGTAGATGGTTTCG--AATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTA 1135596
Query 129486 CGGCATA-CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTC 129544
||| ||| |||| || | || | ||||||| || || | || | ||||| || |
Sbjct 1135597 CGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCC 1135655
Query 129545 GATGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTT 129604
|| ||||||| | ||| | || ||||||||| |||| || || ||||
Sbjct 1135656 TGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTT 1135715
Query 129605 TGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTAC---T 129661
|||| | ||| || | || | || | || | | || |||| | ||| |
Sbjct 1135716 TGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTT 1135775
Query 129662 CGCCTACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCAC 129721
| || | | | ||||| || | |||||||||| |||||| || ||
Sbjct 1135776 TGTCTT----GCTTT--ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTA 1135829
Query 129722 TTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGC 129781
|| | || |||||| |||||||| | |||||| || | ||| |||||||
Sbjct 1135830 CCTCATCCTTCGACGAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGC 1135889
Query 129782 CCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGC 129841
| | || || || |||||||| ||||||||||| ||||||| ||||||||| ||
Sbjct 1135890 CGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGC 1135949
Query 129842 CCGTTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTA 129901
| ||||| || |||| ||||| || | ||| || | ||||| | ||| | |
Sbjct 1135950 CGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCA 1136009
Query 129902 CAAATTTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCC----GTGT 129957
||| || ||||||||| || ||||| | || || ||| ||| ||||
Sbjct 1136010 TAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGT 1136069
Query 129958 ACGGTGTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCG 130017
|| | ||| || | || |||| ||||||| |||||||||| | | ||| ||
Sbjct 1136070 CCGAT----AGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCC 1136125
Query 130018 ACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTA 130077
|| || | ||| |||| || |||| ||| || ||||| |||| || || ||
Sbjct 1136126 ACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACC 1136185
Query 130078 TCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGT 130137
||||| || |||| ||||| || || || ||| | || || | ||||||||
Sbjct 1136186 TCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGC 1136245
Query 130138 TCAACATAAATTGCCATTGCGCCCTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCACG 130194
|| | ||| || || | ||| || ||| ||||| || || || |||| || |
Sbjct 1136246 TCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCC 1136305
Query 130195 GCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTT 130232
| |||||||||||| |||| ||| | | ||| |||||
Sbjct 1136306 GTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTT 1136343
>seq7521
Length=12184106
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| ||||| || ||||| | ||||| || || |||| ||||| || || |
Sbjct 9381349 AAACATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 9381290
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || || | || || | || ||| || || |||||||| || ||||| || ||
Sbjct 9381289 TTCGGACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 9381230
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| || ||||| || || |||||||| ||| | |||||| ||||| ||||||| ||
Sbjct 9381229 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 9381170
Query 22395 CAACATTCAAAA 22406
||||||||| ||
Sbjct 9381169 CAACATTCAGAA 9381158
>seq7535
Length=3646130
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || |||||| | ||||| || || |||| || || || || | |
Sbjct 876262 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGAGCCATCG 876203
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || || || || ||||||||||| || || || |||||
Sbjct 876202 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 876143
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || ||| | |||||| ||||||| | || || || |||
Sbjct 876142 CAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 876083
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || |||||| | ||| | ||| | || |||| || |||
Sbjct 876082 ATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGTCTGCGTGGTGGT 876035
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || |||||| | ||||| || || |||| || ||||| || | |
Sbjct 876034 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCATCG 875975
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || || || || ||||||||||| || || || |||||
Sbjct 875974 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 875915
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || ||||| || ||| | |||||| ||||||| | || || || |||
Sbjct 875914 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 875855
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || || | ||| | ||| | || |||| || ||
Sbjct 875854 ATCCAGAAGGAGTCTACTCTTCATCTGGTTCTTCGTCTGCGTGGTGG 875808
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || || ||||| || ||||| || || || || ||
Sbjct 876406 AAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCTGGAAAG 876347
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| ||||||| | || || || ||||| || || ||||| ||| | |||
Sbjct 876346 CAGCTGGAGGATGGCCGCACCCTGTCGGACTATAACATCCAGAAGGAATCGACCCTTCAT 876287
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
| ||| | || |||| || |||
Sbjct 876286 CTGGTTCTCCGTCTGCGTGGTGGT 876263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419674180508365
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