Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7525 102 6e-17 seq7521 89.7 4e-13 >seq7525 Length=4038190 Score = 102 bits (112), Expect = 6e-17 Identities = 210/306 (69%), Gaps = 10/306 (3%) Strand=Plus/Plus Query 37807 AGGTGTTTGAAAACGCCGACACGCA---CGATCTCTTGTGGAACGCGGCTCAAATTCAGC 37863 ||| ||| || | ||| | ||||| |||||| ||||||| |||| || | ||| Sbjct 439786 AGGAGTTGGAGACGGCCAAAACGCATGACGATCT---GTGGAACTCGGCCCAGCTGCAGA 439842 Query 37864 TTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGG 37923 | ||| ||||| |||||||| | |||||||||| ||| ||| || || ||| Sbjct 439843 TGGTGAAGGAGGGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGG 439902 Query 37924 AATGGTCTGATGATGCTC-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTAC 37982 | ||| | || | || | || ||||| | || || ||||| || ||| ||| Sbjct 439903 AGTGGAC-GAAAACGCCCGAGGAAGCGCTTGAGACGGCGATCTATCTGAACGATCGCTAC 439961 Query 37983 AGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-T 38041 || |||| ||||| ||||| ||||| |||||||| || ||||||| || |||||| | Sbjct 439962 AGTCTGGATGGGCGGGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATC-GCGGGCAT 440020 Query 38042 ACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAA 38101 |||||| | |||| ||| || | || || ||||||||||||||||| | Sbjct 440021 CCACGATCAGGGCTGGAAGGAGCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGA 440080 Query 38102 CGGATG 38107 |||||| Sbjct 440081 CGGATG 440086 >seq7521 Length=12184106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||||||||||||||| || ||||||||| |||||||| || | Sbjct 8321345 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 8321286 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || | || |||| ||||||||||| || ||||| ||||||||||| Sbjct 8321285 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATC 8321232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397011486797842