Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq7525 102 6e-17
seq7521 89.7 4e-13
>seq7525
Length=4038190
Score = 102 bits (112), Expect = 6e-17
Identities = 210/306 (69%), Gaps = 10/306 (3%)
Strand=Plus/Plus
Query 37807 AGGTGTTTGAAAACGCCGACACGCA---CGATCTCTTGTGGAACGCGGCTCAAATTCAGC 37863
||| ||| || | ||| | ||||| |||||| ||||||| |||| || | |||
Sbjct 439786 AGGAGTTGGAGACGGCCAAAACGCATGACGATCT---GTGGAACTCGGCCCAGCTGCAGA 439842
Query 37864 TTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGG 37923
| ||| ||||| |||||||| | |||||||||| ||| ||| || || |||
Sbjct 439843 TGGTGAAGGAGGGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGG 439902
Query 37924 AATGGTCTGATGATGCTC-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTAC 37982
| ||| | || | || | || ||||| | || || ||||| || ||| |||
Sbjct 439903 AGTGGAC-GAAAACGCCCGAGGAAGCGCTTGAGACGGCGATCTATCTGAACGATCGCTAC 439961
Query 37983 AGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-T 38041
|| |||| ||||| ||||| ||||| |||||||| || ||||||| || |||||| |
Sbjct 439962 AGTCTGGATGGGCGGGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATC-GCGGGCAT 440020
Query 38042 ACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAA 38101
|||||| | |||| ||| || | || || ||||||||||||||||| |
Sbjct 440021 CCACGATCAGGGCTGGAAGGAGCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGA 440080
Query 38102 CGGATG 38107
||||||
Sbjct 440081 CGGATG 440086
>seq7521
Length=12184106
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||||||||||||||| || ||||||||| |||||||| || |
Sbjct 8321345 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 8321286
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
|| || | || |||| ||||||||||| || ||||| |||||||||||
Sbjct 8321285 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATC 8321232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397011486797842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |