Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_010105.1
Length=170523
Score E
Sequences producing significant alignments: (Bits) Value
seq236 116 4e-21
>seq236
Length=1144
Score = 116 bits (128), Expect = 4e-21
Identities = 259/385 (67%), Gaps = 14/385 (4%)
Strand=Plus/Minus
Query 141993 TTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 142052
||||| || ||||| |||| ||||||| |||||| || || || | || |||||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 142053 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 142112
|| ||||| | || || || || || ||||| || || ||||||||||| || ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 142113 TGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAAT 142172
||||| |||||||| |||| || || ||| | ||| ||||| ||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965
Query 142173 CATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATT---CAAT---TATTGA 142226
|| ||||||| || || || ||||||| |||| ||||| |||| ||||
Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905
Query 142227 GTTGGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGAACT 142286
| ||||| ||||| || | ||| || || ||| || | |||||| || ||
Sbjct 904 GGTGGCA------TTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCT 851
Query 142287 AAATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAACGAAA-CCTGAC 142345
|| ||||| ||||| ||||| | |||| ||| || || ||||||| |||| |||
Sbjct 850 GAACTGACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAA 791
Query 142346 GAGTACTTACAGCGTCATAAAAACG 142370
| ||| | |||||||| |||||
Sbjct 790 G-GTAGAAATGGCGTCATAGAAACG 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545473853934280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |