Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 114 1e-20
seq7521 114 1e-20
>seq7552
Length=2500597
Score = 114 bits (126), Expect = 1e-20
Identities = 284/431 (66%), Gaps = 0/431 (0%)
Strand=Plus/Plus
Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130
||| |||||||||||||||| |||||||| | ||||| || || | || || |||||
Sbjct 1135289 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 1135348
Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190
|||| || || || || || | ||||| || || || || || || |||
Sbjct 1135349 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 1135408
Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250
|| ||||||| | || |||| | ||||||||| ||||| ||||| | ||| |||
Sbjct 1135409 CAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTC 1135468
Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCT 154310
|||||||| | || | |||||| || | | ||||| || || || |||
Sbjct 1135469 ACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCT 1135528
Query 154311 TCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCA 154370
|| | ||| | ||||| | ||||||| ||||| | |||| | ||| || | ||
Sbjct 1135529 TCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCG 1135588
Query 154371 CTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCA 154430
||||||||||| | | || | || |||||||| | || || | ||| | ||
Sbjct 1135589 CTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCG 1135648
Query 154431 ACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATATCG 154490
| || ||||| | ||| || || || || || ||||| ||||||| |||
Sbjct 1135649 ATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCA 1135708
Query 154491 ATAATTTTATT 154501
|| ||||| ||
Sbjct 1135709 ATGATTTTGTT 1135719
Score = 96.9 bits (106), Expect = 3e-15
Identities = 573/904 (63%), Gaps = 29/904 (3%)
Strand=Plus/Plus
Query 154632 ACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTG 154691
|||||||| | |||||| || ||| |||||||| | || | ||| || |||
Sbjct 1135853 ACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTA 1135912
Query 154692 ATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATA 154751
||||| || || ||||||| |||||||| ||| |||||||| || | ||| ||
Sbjct 1135913 CGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATG 1135972
Query 154752 ATTGTGCGAAACAGACTTC--GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCAT 154809
|| | | || || | || |||||| || || | |||| ||| || |||| |
Sbjct 1135973 ATCG--CAAACCACAGATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGT 1136030
Query 154810 ATTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGT 154869
| |||||| || || |||||| | | |||||| | |||||||| ||
Sbjct 1136031 ACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGT 1136090
Query 154870 CGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCA 154929
|| ||||||| |||||||||||| | || || | ||| |||| ||||| |
Sbjct 1136091 GCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTA 1136150
Query 154930 CCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTA 154989
||| | ||||| |||| || || || || || ||| ||||| ||| |
Sbjct 1136151 TCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCA 1136210
Query 154990 AATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTT 155049
|| | ||| || |||| || | ||||||||||| | ||| | ||| | || ||
Sbjct 1136211 GATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAG 1136270
Query 155050 TGCG---TTTTCCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATG 155106
|| || || || ||||| |||| || | ||| ||||| ||||||| || |
Sbjct 1136271 GCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCG 1136330
Query 155107 GTTCCACGCCGCTGGCCGTGCCGTTGGTGCC----ACGTATCGCGCTGCCGCGAGCACGC 155162
| ||| ||| | | | ||||| || || | ||| || | || || ||
Sbjct 1136331 GCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTA-CG---TTCCCTTCGCGCG- 1136385
Query 155163 GCTTTA-TGAACATTAACGCCCAAACCTCCGCCGTATTTAGATATTTGCGCACAGTCCGC 155221
| | | || || || | || | || ||| | | || || ||| | ||||| | |
Sbjct 1136386 GATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTT 1136445
Query 155222 CAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGA 155281
|| || ||||| || || | ||||| ||||| || ||||||| ||| || || ||
Sbjct 1136446 CAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGA 1136505
Query 155282 TAATT---GAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACAT 155338
| | || | |||| | ||| |||||||| | || || ||||| ||||| |
Sbjct 1136506 AAGCTGGGGACGCTGAGTG--GCC-GCCGCAAACATAGTTGGCGAGGCGTGGGTAAA-GT 1136561
Query 155339 TTTGTTGGCGGTTA--AG-TTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTAT 155395
| | ||| | || ||||| || ||||| || || || ||||| || || ||
Sbjct 1136562 AACGCT--CGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGATGTCCTCGCCATGGAT 1136619
Query 155396 ACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCG 155455
|| || || ||||||||||||||||| || |||||| | | || |||||
Sbjct 1136620 GCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTT 1136679
Query 155456 CTTTAAGTACCCATTTTCCAAAGTTTTATACGCAAAATACTTGTATTCGTAGTCTCGTTT 155515
| ||||| |||||| |||||| | | ||||| ||||| || |||| || |
Sbjct 1136680 CAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCGCGATC 1136739
Query 155516 GTAA 155519
||||
Sbjct 1136740 GTAA 1136743
>seq7521
Length=12184106
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||||| ||||||| ||||| || || || |||||||| || |
Sbjct 8321345 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 8321286
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || |||||||||||||| | || || |||||||| || || ||
Sbjct 8321285 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGG 8321226
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||||| || || || || || ||| ||| ||| | ||||| || || ||
Sbjct 8321225 GATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 8321166
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | ||||| ||||| || ||||| ||
Sbjct 8321165 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 8321115
Score = 105 bits (116), Expect = 7e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| ||||||||||| || | || ||||| | || || |||||||||||||| | ||
Sbjct 9381158 TTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATC 9381217
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| |||||||| || || ||||| ||||| || || || || ||| ||| ||| |||
Sbjct 9381218 AGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCG 9381277
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
| || || | || || || | || | |||||||||||| | ||||| ||||||
Sbjct 9381278 ATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAA 9381337
Query 64436 ATTTGCATTTT 64446
|| ||||| ||
Sbjct 9381338 ATCTGCATGTT 9381348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499579090463240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |