Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq7552 102 8e-17 >seq7552 Length=2500597 Score = 102 bits (112), Expect = 8e-17 Identities = 260/396 (66%), Gaps = 0/396 (0%) Strand=Plus/Minus Query 93979 GGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGG 94038 || || | ||||| || ||| | ||||| || ||||| | || || || ||||| Sbjct 1136463 GGCATCTACGACACGCTGAAGCAGTGTGCCCTAATTTCAAAGTCGGCCGGTGGCATCGGA 1136404 Query 94039 ATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCC 94098 | | || ||| | || || | ||| | |||||| |||||| || || | || Sbjct 1136403 CTGAACGTGCACTGTATCCGCGCGAAGGGAACGTACATCTCCGGTACGAACGGGATTTCG 1136344 Query 94099 AACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGT 94158 ||||| || || || ||||| || |||| |||||| |||| || ||||| || |||||| Sbjct 1136343 AACGGTCTGGTGCCGATGCTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGT 1136284 Query 94159 GGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAG 94218 || | | || || | ||||| ||||||||||||| ||||| | || | Sbjct 1136283 GGCAACAAGCGGCCTGGAGCATTCGCCATCTATCTCGAGCCGTGGCATGGTGATATATTC 1136224 Query 94219 GCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTC 94278 | || |||| ||| || ||| |||||| || || | || | ||| | || Sbjct 1136223 GAGTTTCTCGATCTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTT 1136164 Query 94279 TACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGT 94338 ||||| |||||| | || ||||| || ||| | || || ||| ||| |||||| Sbjct 1136163 TACGCACTCTGGATACCGGACCTGTTCATGCAGCGTGTGGAGGCGAACGAAATGTGGAGT 1136104 Query 94339 CTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || | || || | || |||||||| || || ||| Sbjct 1136103 CTGATGTGCCCGCACGATTGTCCCGGGCTATCGGAC 1136068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494658137715160