Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq7517 109 4e-19
seq7527 82.4 6e-11
>seq7517
Length=11427604
Score = 109 bits (120), Expect = 4e-19
Identities = 171/245 (70%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
||||||||||| ||||||| |||||| || || | ||| |||| | ||||||||
Sbjct 7618729 GCCGGGTTCGGGGTGACGGGCGGCGTACACCGCCTCTGGTGCCACCGGTCGTACAAGGCG 7618788
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||| | | | ||||| | |||| |||| | || || |||||||| |||
Sbjct 7618789 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAACACGATC 7618848
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519
| ||||||| || || | | |||||||||||||| || |||| | || |||
Sbjct 7618849 TACGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAAACGAACGGTGATCCA 7618908
Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579
|||||||| ||| |||| ||| || | ||||||| || ||||| ||| || |||| |
Sbjct 7618909 CACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTGCGCAAGCAT 7618968
Query 108580 CCCGA 108584
|| ||
Sbjct 7618969 CCGGA 7618973
Score = 95.1 bits (104), Expect = 9e-15
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
||||||||||| || |||||||||| ||| ||| | ||||| ||| || ||||||||
Sbjct 7624776 GCCGGGTTCGGCGTTACGGCCGGCGCCCACCGGCTCTGGACGCACCGGGCGTACAAGGCG 7624835
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||| | | | ||||| | |||| || || | || ||||||| | |
Sbjct 7624836 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTGTCTGTCCGGCCAGAACAGCCTG 7624895
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519
| ||||||| || || | | |||||||||||||| || ||| ||||||||
Sbjct 7624896 TTCGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAGACGGATGCCGACCCG 7624955
Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569
|||||| | ||| |||| |||| | | | ||||| || ||||| ||||
Sbjct 7624956 CACAACTCGAACCGGGGCTTCTTCTACGCCCACGTCGGCTGGCTGCTGAT 7625005
Score = 91.5 bits (100), Expect = 1e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
||||| | ||||| ||||||||||||||||| ||||||||||| | ||||||||||| |
Sbjct 7621261 TGGCTATGGGCGAAGGATGGCACAACTACCATCACGTGTTCCCGTGGGACTACAAGGCAG 7621320
Query 108941 CCGAGTTGGGGAACGACT 108958
||||| |||| ||| |||
Sbjct 7621321 CCGAGCTGGGCAACTACT 7621338
>seq7527
Length=9476429
Score = 82.4 bits (90), Expect = 6e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929
|||||| |||| || | ||||| || |||||||||||||| ||||||||||| | ||
Sbjct 8618218 GGTGGCTTCGTTCGCGTTTGGCGAAGGTTGGCACAACTACCATCACGTGTTCCCGTGGGA 8618277
Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957
||||||| | |||||| |||| ||| ||
Sbjct 8618278 CTACAAGACGGCCGAGCTGGGCAACTAC 8618305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381723847302024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |