Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq7517 109 4e-19 seq7527 82.4 6e-11 >seq7517 Length=11427604 Score = 109 bits (120), Expect = 4e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||||| |||||| || || | ||| |||| | |||||||| Sbjct 7618729 GCCGGGTTCGGGGTGACGGGCGGCGTACACCGCCTCTGGTGCCACCGGTCGTACAAGGCG 7618788 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| |||| | || || |||||||| ||| Sbjct 7618789 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAACACGATC 7618848 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || |||| | || ||| Sbjct 7618849 TACGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAAACGAACGGTGATCCA 7618908 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||||| ||| |||| ||| || | ||||||| || ||||| ||| || |||| | Sbjct 7618909 CACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTGCGCAAGCAT 7618968 Query 108580 CCCGA 108584 || || Sbjct 7618969 CCGGA 7618973 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| || |||||||||| ||| ||| | ||||| ||| || |||||||| Sbjct 7624776 GCCGGGTTCGGCGTTACGGCCGGCGCCCACCGGCTCTGGACGCACCGGGCGTACAAGGCG 7624835 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| || || | || ||||||| | | Sbjct 7624836 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTGTCTGTCCGGCCAGAACAGCCTG 7624895 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || ||| |||||||| Sbjct 7624896 TTCGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAGACGGATGCCGACCCG 7624955 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 |||||| | ||| |||| |||| | | | ||||| || ||||| |||| Sbjct 7624956 CACAACTCGAACCGGGGCTTCTTCTACGCCCACGTCGGCTGGCTGCTGAT 7625005 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 ||||| | ||||| ||||||||||||||||| ||||||||||| | ||||||||||| | Sbjct 7621261 TGGCTATGGGCGAAGGATGGCACAACTACCATCACGTGTTCCCGTGGGACTACAAGGCAG 7621320 Query 108941 CCGAGTTGGGGAACGACT 108958 ||||| |||| ||| ||| Sbjct 7621321 CCGAGCTGGGCAACTACT 7621338 >seq7527 Length=9476429 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929 |||||| |||| || | ||||| || |||||||||||||| ||||||||||| | || Sbjct 8618218 GGTGGCTTCGTTCGCGTTTGGCGAAGGTTGGCACAACTACCATCACGTGTTCCCGTGGGA 8618277 Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||||| | |||||| |||| ||| || Sbjct 8618278 CTACAAGACGGCCGAGCTGGGCAACTAC 8618305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381723847302024