Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7552 426 2e-114 seq7526 118 1e-21 seq7517 105 7e-18 seq7521 84.2 2e-11 >seq7552 Length=2500597 Score = 426 bits (472), Expect = 2e-114 Identities = 1018/1529 (67%), Gaps = 20/1529 (1%) Strand=Plus/Plus Query 153027 TGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAA 153086 ||||| ||||| || |||||||||| || ||| || || || || || ||| | Sbjct 1135235 TGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTAC 1135294 Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 || || || ||||| || ||||| || ||||| ||||||| || |||||||| ||| Sbjct 1135295 GGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCC 1135354 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | || || ||||| || | ||||||| || | ||||||||| | ||| | | Sbjct 1135355 AACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTC 1135414 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 ||||| ||| |||| | ||||||||| |||||||| || | || || | ||| Sbjct 1135415 CACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGA 1135474 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 ||||| | |||| ||| || || || ||||| || ||||| || || ||| Sbjct 1135475 CTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGC 1135534 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386 ||||| ||||| ||||||||| ||||| | ||| || || |||||||| ||| Sbjct 1135535 GCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCG 1135594 Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446 ||||| ||||| ||| | || || ||||||| ||||| | |||| ||||| || Sbjct 1135595 TACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGC 1135654 Query 153447 CGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATT 153506 | || | ||| |||| | || || | |||||||| |||| ||| || ||| Sbjct 1135655 CTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATT 1135714 Query 153507 TTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTC 153566 ||||| || |||||| || |||| | |||| || || | || ||||| || Sbjct 1135715 TTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGT- 1135773 Query 153567 ATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTC 153626 || ||| ||| | |||| ||| || || |||||||| || || || | Sbjct 1135774 --TTTGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACC 1135831 Query 153627 TCTTCGG-CGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCC 153685 || || || || ||||| || || || | ||| | |||| ||||| ||| ||| Sbjct 1135832 TCATCCTTCGACGA-GTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCC 1135890 Query 153686 CAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCC 153745 | ||| ||||| || ||||| |||||||| || || ||| | |||||||||||| |||| Sbjct 1135891 GATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCC 1135950 Query 153746 GGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTG 153802 ||| || || |||| ||||| ||| ||||| ||| |||||||| |||| || | Sbjct 1135951 GGTTTCCACCTGCGATTCGATGATCGCAAACC---ACAGATCCTGCGCCTTCACCTGCCG 1136007 Query 153803 CCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCA 153862 | | |||| ||||| ||||||| | | |||||| ||| ||||| ||||| || Sbjct 1136008 CATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGT 1136067 Query 153863 GTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGAC 153922 ||| | || |||||||| | ||||| |||||||| |||||| |||| || | || Sbjct 1136068 GTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCAC 1136127 Query 153923 GCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATC 153982 || |||||||||| ||||| | |||||| ||||| | | ||| || || | || Sbjct 1136128 ACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTC 1136187 Query 153983 CTCCGCGCCCATGTTGCGTTTCAGATTGAG-CACGCTATAGATGTCGGCGTGCCAGGGTT 154041 |||| ||| |||| ||||||| ||| || | | | || || | ||||| || | Sbjct 1136188 CTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGA-ATATATCACCATGCCACGGCT 1136246 Query 154042 CAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCACCA 154098 | | |||| ||| | || || ||| || || ||||||||||||| || || Sbjct 1136247 CGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCG 1136306 Query 154099 TATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT--CGAATT 154156 |||||||| ||||||||| ||| || |||| ||| | | | ||||| || || | Sbjct 1136307 TATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGA-- 1136364 Query 154157 GATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTT 154216 ||| | | || ||||| | |||||||| | || ||||| ||| | |||| Sbjct 1136365 GATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTT 1136424 Query 154217 TGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGAC 154276 ||| || || || | |||||| ||||||||| || |||||||| ||| | Sbjct 1136425 TGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACAT 1136484 Query 154277 GCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGG 154336 | | || ||| || || | | || ||| | || |||||| ||| | || || Sbjct 1136485 GGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGTTGG 1136544 Query 154337 ACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGAT 154396 ||||| ||||| | | || || ||| || ||||| || | ||||| Sbjct 1136545 CGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGAT 1136604 Query 154397 ATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 || ||||| || ||||| | || |||||||| ||||||||||| || || ||| ||| Sbjct 1136605 GTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGAT 1136664 Query 154457 TCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTA 154516 | | | ||||||| | ||| ||| | |||||| | |||||||| ||||| Sbjct 1136665 TTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTA 1136724 Query 154517 TTCAAAATCTAGCTCATGAGCGATGGCCG 154545 | || || | || | | |||||||| Sbjct 1136725 CCCGAAGTCGCGATCGTAAATGATGGCCG 1136753 >seq7526 Length=6110091 Score = 118 bits (130), Expect = 1e-21 Identities = 296/441 (67%), Gaps = 8/441 (2%) Strand=Plus/Minus Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363 ||| | ||||| |||| ||| |||||||||| ||||| | ||||| |||| Sbjct 4673380 CTGTTCAATGCCATCGAA-ACGCTGCCGTGCGTGAAGCGGAAGGCGGACTGGGCGCTGAA 4673322 Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423 |||||| |||| | | |||| | | |||||| | ||||| ||||| || || Sbjct 4673321 CTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGA 4673262 Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483 ||| | || || ||| ||||| ||||| ||||| | | || | | ||| | || Sbjct 4673261 GGGTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGAT 4673202 Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543 ||| || || || ||| |||||| |||| |||||||||||||| |||||| ||||| Sbjct 4673201 GCCGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTT 4673142 Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGA 52602 ||| ||||| | |||| | ||| | ||| | || ||| | || | || Sbjct 4673141 TGCCTGCCTGATGTTCAAGTATCTGGTG-CAGAAGCCGTCGA--AGGAGCGCGTGACGGA 4673085 Query 52603 GCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCG 52662 | || || || ||||| ||||| ||||||| | ||| || |||||||| | Sbjct 4673084 G-ATCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGG 4673026 Query 52663 AGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTC 52722 | |||||||||||||| | |||| ||||||| ||||||||||| |||||| Sbjct 4673025 ATATGCTGGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTT 4672966 Query 52723 TGTTGGTGCAGCTCGGGCAGC 52743 || || | |||| |||| || Sbjct 4672965 TGCTGCTCGAGCT-GGGCTGC 4672946 >seq7517 Length=11427604 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||| | || || || | | | |||||||| || |||||||||||| Sbjct 2898511 GCCACCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGA 2898452 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| ||| || || || ||||||| |||| | |||||| || || ||||| Sbjct 2898451 CAGAGTACGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGG 2898392 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||| | || ||| || Sbjct 2898391 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGAC 2898332 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | || || |||||||| || || || || |||||||| Sbjct 2898331 CTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 2898284 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||| | || || || | | | |||||||| || |||||||||||| Sbjct 2898739 GCCACCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGA 2898680 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| ||| || || || ||||||| |||| | |||||| || || ||||| Sbjct 2898679 CAAGGTACGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGG 2898620 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||| | || ||| || Sbjct 2898619 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGAC 2898560 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | ||| | || || |||||||| || || || || ||||||||| Sbjct 2898559 CTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCATG 2898511 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || ||||| ||| || || || ||||||| Sbjct 2898933 GACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCCAGCTGCTTACCGGCG 2898874 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | |||||| || || ||||| || || || ||||| ||| || || | Sbjct 2898873 AAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 2898814 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | || ||| ||||| | ||| | || || |||||||| || || Sbjct 2898813 TTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTC 2898754 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 2898753 ACGAAGATCTGCATG 2898739 >seq7521 Length=12184106 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||||||||||||| | ||| || ||||| || || || |||| ||| Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | |||||||| || || || || || ||||| ||||| ||| ||| || | | | Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCT 9381275 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||| | | ||| ||||| | || | || || || || || ||||| || | Sbjct 9381276 CGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGA 9381335 Query 138605 AAATCTGCATG 138615 ||||||||||| Sbjct 9381336 AAATCTGCATG 9381346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496197135291120