Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_012741.1
Length=171451
Score E
Sequences producing significant alignments: (Bits) Value
seq236 118 1e-21
>seq236
Length=1144
Score = 118 bits (130), Expect = 1e-21
Identities = 255/379 (67%), Gaps = 2/379 (1%)
Strand=Plus/Minus
Query 143061 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 143120
|||||| || ||||| |||| ||||||| |||||| || || || | || |||||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 143121 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 143180
|| ||||| | || || || || || ||||| || || ||||||||||| || ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 143181 TGGAATAACACCAGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAAT 143240
||||| || ||||| |||| || || ||| | ||| ||||| ||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965
Query 143241 CATACCAACGTTAATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGC 143300
|| |||| || || || || ||||||| |||| ||||| | || | | |||
Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905
Query 143301 AGTTTTGTTAATAGATTTCAGTGAGTCACCTGCTTCAATAACAACACAAGAACTAAATTG 143360
|| ||||| || | ||| ||||| ||| || | ||||| || || || ||
Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845
Query 143361 ACGGGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAACGAAA-CCTGACGAGTAC 143419
||||||||| ||||| | |||| ||| || || ||||||| |||| ||| | |||
Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAG-GTAG 786
Query 143420 TTACAGCGTCATAAAAACG 143438
| |||||||| |||||
Sbjct 785 AAATGGCGTCATAGAAACG 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548443063394760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |