Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_012741.1 Length=171451 Score E Sequences producing significant alignments: (Bits) Value seq236 118 1e-21 >seq236 Length=1144 Score = 118 bits (130), Expect = 1e-21 Identities = 255/379 (67%), Gaps = 2/379 (1%) Strand=Plus/Minus Query 143061 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 143120 |||||| || ||||| |||| ||||||| |||||| || || || | || ||||| Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085 Query 143121 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 143180 || ||||| | || || || || || ||||| || || ||||||||||| || |||| Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025 Query 143181 TGGAATAACACCAGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAAT 143240 ||||| || ||||| |||| || || ||| | ||| ||||| || Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965 Query 143241 CATACCAACGTTAATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGC 143300 || |||| || || || || ||||||| |||| ||||| | || | | ||| Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905 Query 143301 AGTTTTGTTAATAGATTTCAGTGAGTCACCTGCTTCAATAACAACACAAGAACTAAATTG 143360 || ||||| || | ||| ||||| ||| || | ||||| || || || || Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845 Query 143361 ACGGGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAACGAAA-CCTGACGAGTAC 143419 ||||||||| ||||| | |||| ||| || || ||||||| |||| ||| | ||| Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAG-GTAG 786 Query 143420 TTACAGCGTCATAAAAACG 143438 | |||||||| ||||| Sbjct 785 AAATGGCGTCATAGAAACG 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548443063394760