Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq7868 257 4e-64 >seq7868 Length=40667 Score = 257 bits (284), Expect = 4e-64 Identities = 537/789 (68%), Gaps = 12/789 (2%) Strand=Plus/Minus Query 12768 TGGACCGCGGTCATGTACGGATGGCGTCGTG--TCG-ATGCGGGCCTGCGCCGGTTTCGC 12824 ||||| || || || | ||| |||||||| | ||| ||| ||| |||| || || Sbjct 40665 TGGACGGCAGTTATTTTCGGCTGGCGTCGGGCATCGGATGGATGCCGGCGC---TTCCGG 40609 Query 12825 ACAGGATACGAGGAGGTCGCGCGCAAGAACGGTAAGTCGACGTGGAAGGCGGGTCAGGGC 12884 || || || ||||| || || || || || || ||||| || ||| || | ||| Sbjct 40608 ACGGGCTATGAGGAAGTTGCTCGGAAAAATGGCAAGTCTACCTGGTGGGGGCCGATTGGC 40549 Query 12885 GACTACCTGTTTCTGATGGATGGGGAGCAGGGCGCAGAGGTCTACACGATTGCGACGACG 12944 ||||||| |||||||||| || || |||||||| ||| |||||||||||||| Sbjct 40548 TCATACCTGTGGATGATGGATGGTGAAGGCGGTGCAGAGGTTTACTCGATTGCGACGACG 40489 Query 12945 CGCGAGCAGGCGATGAGCGTGTTCAAGCCGGCGCTCGACAACTACCGGCGTCGGTGCCGG 13004 || |||||||| ||| || |||||||| || | ||||| | ||| | | |||| Sbjct 40488 CGAGAGCAGGCCATGTCTGTATTCAAGCCTGCTTTTGACAATATCAAGCGCCTGCGCCGC 40429 Query 13005 CGATCGAAACGGCTGGCGCGATCGATCAAGGTGTACGACGGAACCAACCAAGAGCGGATC 13064 | ||| ||||||| ||||||| | | | ||||| | || ||||| || Sbjct 40428 CAGTCGCCCAGGCTGGCCAAGTCGATCAGGATTTTTGACGGGGCAAATCAAGAAAAAATG 40369 Query 13065 GTGTTCGGC-AGCAGCGTGTTCAAGCCGTTGCCGGCGAACGCGGAATCGCTCGACGGTTT 13123 | ||| || | || | |||||| | ||||| || || || ||||| ||||| | Sbjct 40368 TCCATTGGCGAGTCG-GTATATAAGCCGCTTCCGGCCAATGCTGAGTCGCTAGACGGCCT 40310 Query 13124 GAACCCGTCGGTTTGTATGGTCGACGAGCTGCACGCGCACAAGACTCGGGAAGTTTGGGA 13183 ||||| | | ||| | || || ||||| || || ||||| || || || |||||||| Sbjct 40309 AAACCCTTATGCATGTCTCGTTGATGAGCTTCATGCCCACAAAACCCGCGAGGTTTGGGA 40250 Query 13184 CGTGATGGAGTCGGCGCTCGGCGCGCG-ACTCCAGCCTTTGATTTCAGCCATCACGACGG 13242 |||||||||||||| || || || || |||| |||| |||| || ||||| || | Sbjct 40249 TGTGATGGAGTCGGCACTTGGTGCACGGACTC-AGCCGCTGATCAATGCAATCACCACTG 40191 Query 13243 CCGGCTACATCCTCGACGGGATCTGCACTGAGATTCGCATGTATCTCGTGATGATCCTGC 13302 |||||| ||| | || || || |||| ||| |||||| |||| | |||| || |||| Sbjct 40190 CCGGCTTCATTTTGGATGGTATTTGCATTGAAATTCGCTCGTATTTGGTGAGAATTCTGC 40131 Query 13303 GGGGTGAGAAGATCGACGATAGCTTTTTCGGCTACATCTACACGCTTGATGACGACGACG 13362 | || ||| | || ||||||||||| || || |||||| | ||||| | || | Sbjct 40130 GCGGAGAGGCGCAGGATGATAGCTTTTTTGGTGTTATTTACACGATAGATGAGGGGGATG 40071 Query 13363 ATCCGTTCGACCCGGCTGTTTGGATCAAGGCAAACCCGAGCCTGGGTAGTGCGAAGACGG 13422 | || || |||| |||| || || || || ||||| ||| ||| ||||| Sbjct 40070 ACCCTTTTTCGCCGGAAAGTTGGCCGAAAGCTAATCCTAGCCTTGGTTCTGCAAAGACCT 40011 Query 13423 TCGAGTACATGCGTGCGCAGGCGACGAAGGCAGCCGA-GCTGCCGAGCGCGAAGGCCAAC 13481 | || ||| ||||| || ||||||| | || ||||| ||| ||| ||| Sbjct 40010 ACACATATATGGAGGCGCAAGCAGCGAAGGC-GAAGATTATGCCGTCGGCGCGGGCAAAC 39952 Query 13482 TTTCCCACCAAAGACCTGAACGTCTGGGTCAATGGTGCCTTGAGCTGGTTCGACATGCAG 13541 || | || ||||||||||| || | ||| || | ||| |||||| ||||||| | Sbjct 39951 TTCCTGACAAAAGACCTGAATGTGTTTGTCGGTGACTCGTTGTCCTGGTTTGACATGCTG 39892 Query 13542 GTGTGGGAC 13550 || |||||| Sbjct 39891 GTTTGGGAC 39883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127529664851316