Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq7868 257 4e-64
>seq7868
Length=40667
Score = 257 bits (284), Expect = 4e-64
Identities = 537/789 (68%), Gaps = 12/789 (2%)
Strand=Plus/Minus
Query 12768 TGGACCGCGGTCATGTACGGATGGCGTCGTG--TCG-ATGCGGGCCTGCGCCGGTTTCGC 12824
||||| || || || | ||| |||||||| | ||| ||| ||| |||| || ||
Sbjct 40665 TGGACGGCAGTTATTTTCGGCTGGCGTCGGGCATCGGATGGATGCCGGCGC---TTCCGG 40609
Query 12825 ACAGGATACGAGGAGGTCGCGCGCAAGAACGGTAAGTCGACGTGGAAGGCGGGTCAGGGC 12884
|| || || ||||| || || || || || || ||||| || ||| || | |||
Sbjct 40608 ACGGGCTATGAGGAAGTTGCTCGGAAAAATGGCAAGTCTACCTGGTGGGGGCCGATTGGC 40549
Query 12885 GACTACCTGTTTCTGATGGATGGGGAGCAGGGCGCAGAGGTCTACACGATTGCGACGACG 12944
||||||| |||||||||| || || |||||||| ||| ||||||||||||||
Sbjct 40548 TCATACCTGTGGATGATGGATGGTGAAGGCGGTGCAGAGGTTTACTCGATTGCGACGACG 40489
Query 12945 CGCGAGCAGGCGATGAGCGTGTTCAAGCCGGCGCTCGACAACTACCGGCGTCGGTGCCGG 13004
|| |||||||| ||| || |||||||| || | ||||| | ||| | | ||||
Sbjct 40488 CGAGAGCAGGCCATGTCTGTATTCAAGCCTGCTTTTGACAATATCAAGCGCCTGCGCCGC 40429
Query 13005 CGATCGAAACGGCTGGCGCGATCGATCAAGGTGTACGACGGAACCAACCAAGAGCGGATC 13064
| ||| ||||||| ||||||| | | | ||||| | || ||||| ||
Sbjct 40428 CAGTCGCCCAGGCTGGCCAAGTCGATCAGGATTTTTGACGGGGCAAATCAAGAAAAAATG 40369
Query 13065 GTGTTCGGC-AGCAGCGTGTTCAAGCCGTTGCCGGCGAACGCGGAATCGCTCGACGGTTT 13123
| ||| || | || | |||||| | ||||| || || || ||||| ||||| |
Sbjct 40368 TCCATTGGCGAGTCG-GTATATAAGCCGCTTCCGGCCAATGCTGAGTCGCTAGACGGCCT 40310
Query 13124 GAACCCGTCGGTTTGTATGGTCGACGAGCTGCACGCGCACAAGACTCGGGAAGTTTGGGA 13183
||||| | | ||| | || || ||||| || || ||||| || || || ||||||||
Sbjct 40309 AAACCCTTATGCATGTCTCGTTGATGAGCTTCATGCCCACAAAACCCGCGAGGTTTGGGA 40250
Query 13184 CGTGATGGAGTCGGCGCTCGGCGCGCG-ACTCCAGCCTTTGATTTCAGCCATCACGACGG 13242
|||||||||||||| || || || || |||| |||| |||| || ||||| || |
Sbjct 40249 TGTGATGGAGTCGGCACTTGGTGCACGGACTC-AGCCGCTGATCAATGCAATCACCACTG 40191
Query 13243 CCGGCTACATCCTCGACGGGATCTGCACTGAGATTCGCATGTATCTCGTGATGATCCTGC 13302
|||||| ||| | || || || |||| ||| |||||| |||| | |||| || ||||
Sbjct 40190 CCGGCTTCATTTTGGATGGTATTTGCATTGAAATTCGCTCGTATTTGGTGAGAATTCTGC 40131
Query 13303 GGGGTGAGAAGATCGACGATAGCTTTTTCGGCTACATCTACACGCTTGATGACGACGACG 13362
| || ||| | || ||||||||||| || || |||||| | ||||| | || |
Sbjct 40130 GCGGAGAGGCGCAGGATGATAGCTTTTTTGGTGTTATTTACACGATAGATGAGGGGGATG 40071
Query 13363 ATCCGTTCGACCCGGCTGTTTGGATCAAGGCAAACCCGAGCCTGGGTAGTGCGAAGACGG 13422
| || || |||| |||| || || || || ||||| ||| ||| |||||
Sbjct 40070 ACCCTTTTTCGCCGGAAAGTTGGCCGAAAGCTAATCCTAGCCTTGGTTCTGCAAAGACCT 40011
Query 13423 TCGAGTACATGCGTGCGCAGGCGACGAAGGCAGCCGA-GCTGCCGAGCGCGAAGGCCAAC 13481
| || ||| ||||| || ||||||| | || ||||| ||| ||| |||
Sbjct 40010 ACACATATATGGAGGCGCAAGCAGCGAAGGC-GAAGATTATGCCGTCGGCGCGGGCAAAC 39952
Query 13482 TTTCCCACCAAAGACCTGAACGTCTGGGTCAATGGTGCCTTGAGCTGGTTCGACATGCAG 13541
|| | || ||||||||||| || | ||| || | ||| |||||| ||||||| |
Sbjct 39951 TTCCTGACAAAAGACCTGAATGTGTTTGTCGGTGACTCGTTGTCCTGGTTTGACATGCTG 39892
Query 13542 GTGTGGGAC 13550
|| ||||||
Sbjct 39891 GTTTGGGAC 39883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127529664851316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |