Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7516 109 7e-19 >seq7516 Length=3907879 Score = 109 bits (120), Expect = 7e-19 Identities = 188/268 (70%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 175901 GTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTG 175959 |||||||||||||| | | ||| || ||||||||| | || ||||| || || || Sbjct 2870249 GTGAAGATGTACCTGGGGCTGG-CGCTGTCCTTGCCACCCGTCAGCCGCGTACCGAACTG 2870191 Query 175960 ACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGAC 176019 ||| | || | || |||||||| ||||| ||| | |||| | ||||| |||| Sbjct 2870190 ACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 2870131 Query 176020 AATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGC 176079 ||||| ||| || | || |||||||||||||| ||||| |||||||| | | Sbjct 2870130 GATCGTCGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCCACCGAACC 2870071 Query 176080 CGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTG-TGGAAGCACGCATACATGA 176138 |||| ||| |||||||||| ||| |||| | ||| | | |||||||| |||| | Sbjct 2870070 GGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCG-TCTCGCTTGAAGCACGTGTACAGCA 2870012 Query 176139 CCTTTCTCTGTGAAGGCTTGAGGCCGTC 176166 |||| | ||| ||||| | ||||| Sbjct 2870011 CCTTGCGCTGGCCCGGCTTCAACCCGTC 2869984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613426516134360