Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_013693.1
Length=158006
Score E
Sequences producing significant alignments: (Bits) Value
seq236 145 8e-30
>seq236
Length=1144
Score = 145 bits (160), Expect = 8e-30
Identities = 222/314 (71%), Gaps = 2/314 (1%)
Strand=Plus/Minus
Query 53754 ATGCCACAGAGGGATGTACGCTGTCGCCGCACCACCACGAATGCCGCCCTGGGAGCAAGA 53813
|||||||| ||| | || || || ||||||||||| | ||||||||| ||||| ||
Sbjct 1114 ATGCCACATCGGGTAGAACAACGTGGCAGCACCACCACGCACGCCGCCCTGAGAGCAGGA 1055
Query 53814 CTTGAGCGCCCCAGTGAGATACTTGATGAATGGGATCAGGCCTGTGTGAACCATCTCTCC 53873
|| | || || || |||| ||| || || ||| || || | |||||
Sbjct 1054 TTTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATGCAGCCGGTATGGAAAGCTTCTCC 995
Query 53874 GCCGCGAATAGGACTGCCAATCCCACGGATA-GCCCCGACGTCAAAGCCGATACCCGCAC 53932
|||||||| || || || | | ||||||| | |||| ||| | |||||| |||||||
Sbjct 994 ACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCCG-CGTTGATGCCGATCCCCGCAC 936
Query 53933 GTTTGGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCAC 53992
||| ||| || || | || |||| | | || || || || || |||||| | ||||
Sbjct 935 GTTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCATTAATCGAATCCAGGCTATCAC 876
Query 53993 CAGTTTTGATCAGGACACAGGAACTGAACTGACGGGTAGGAGTACGAACACCTGCCATAA 54052
|| || |||||| |||||||| |||||||||||||| || ||||| || || | ||| |
Sbjct 875 CACATTCGATCAGCACACAGGAGCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGA 816
Query 54053 TCGGGGTGGGAAGA 54066
| || || || |||
Sbjct 815 TTGGCGTAGGCAGA 802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505424721588560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |