Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq236 145 8e-30 >seq236 Length=1144 Score = 145 bits (160), Expect = 8e-30 Identities = 222/314 (71%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 53754 ATGCCACAGAGGGATGTACGCTGTCGCCGCACCACCACGAATGCCGCCCTGGGAGCAAGA 53813 |||||||| ||| | || || || ||||||||||| | ||||||||| ||||| || Sbjct 1114 ATGCCACATCGGGTAGAACAACGTGGCAGCACCACCACGCACGCCGCCCTGAGAGCAGGA 1055 Query 53814 CTTGAGCGCCCCAGTGAGATACTTGATGAATGGGATCAGGCCTGTGTGAACCATCTCTCC 53873 || | || || || |||| ||| || || ||| || || | ||||| Sbjct 1054 TTTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATGCAGCCGGTATGGAAAGCTTCTCC 995 Query 53874 GCCGCGAATAGGACTGCCAATCCCACGGATA-GCCCCGACGTCAAAGCCGATACCCGCAC 53932 |||||||| || || || | | ||||||| | |||| ||| | |||||| ||||||| Sbjct 994 ACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCCG-CGTTGATGCCGATCCCCGCAC 936 Query 53933 GTTTGGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCAC 53992 ||| ||| || || | || |||| | | || || || || || |||||| | |||| Sbjct 935 GTTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCATTAATCGAATCCAGGCTATCAC 876 Query 53993 CAGTTTTGATCAGGACACAGGAACTGAACTGACGGGTAGGAGTACGAACACCTGCCATAA 54052 || || |||||| |||||||| |||||||||||||| || ||||| || || | ||| | Sbjct 875 CACATTCGATCAGCACACAGGAGCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGA 816 Query 54053 TCGGGGTGGGAAGA 54066 | || || || ||| Sbjct 815 TTGGCGTAGGCAGA 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505424721588560