Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq7517 143 6e-29
seq7535 134 3e-26
seq7521 132 1e-25
>seq7517
Length=11427604
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | ||||||||||| |||| ||||||||| | || ||| | ||| |||
Sbjct 2898495 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCT 2898436
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||| | ||||||||| || ||| ||| || || |||
Sbjct 2898435 TCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 2898376
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| ||||| | | || || |||| |||||| |||
Sbjct 2898375 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 2898316
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 2898315 TTGCCAGTCAGCGTCTTCACGAAGATCTG 2898287
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | ||||||||||| |||| ||||||||| | ||| || | ||| |||
Sbjct 2898723 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCT 2898664
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||| | ||||||||| || ||| ||| || || |||
Sbjct 2898663 TCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 2898604
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| ||||| | | || || |||| |||||| |||
Sbjct 2898603 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 2898544
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 2898543 TTGCCAGTCAGCGTCTTCACGAAGATCTG 2898515
Score = 138 bits (152), Expect = 3e-27
Identities = 147/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
||||||||||| |||| ||||||||| | ||| || | ||| |||||||||||||| |||
Sbjct 2898936 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCCAGCTGCTTACCG 2898877
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552
|||||||| | ||||||||| || ||| ||| || || ||||| ||||| ||||
Sbjct 2898876 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTC 2898817
Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612
||| |||| ||||| | | || || |||| |||||| ||||| || || || ||
Sbjct 2898816 ACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTC 2898757
Query 199613 TTCACAAAAATTTG 199626
||||| || || ||
Sbjct 2898756 TTCACGAAGATCTG 2898743
>seq7535
Length=3646130
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || || || ||||| |||||||| |||| ||| ||||| | || || | |||||
Sbjct 875823 AGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 875882
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||||||||||||||| ||||||||||| || || ||||| || |||
Sbjct 875883 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 875942
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| || | || || | || || || |||| ||||| |||
Sbjct 875943 TGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACTTCCAGGGTGATGGTC 876002
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||||||||| ||||| ||
Sbjct 876003 TTTCCGGTCAGAGTTTTCACGAAAATCTG 876031
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || || || || || |||||||| |||| ||| ||||| | || || | |||||
Sbjct 876051 AGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 876110
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||||||||| |||||||| ||||||||||| || || ||||| || |||
Sbjct 876111 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 876170
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| || | || || | || || || || | ||||| |||
Sbjct 876171 TGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCGAGGGTGATGGTC 876230
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||||||||| ||||| ||
Sbjct 876231 TTTCCGGTCAGAGTTTTCACGAAAATCTG 876259
Score = 96.9 bits (106), Expect = 8e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || || || || ||||| ||||| |||| ||| ||||| | || || | |||||
Sbjct 876279 AGAACCAGATGAAGGGTCGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 876338
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||||||||| |||||||| ||||||||||| || || ||||| || |||
Sbjct 876339 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 876398
Query 199538 TGAATCTTTTGCTTCACG 199555
|| ||||| |||||||
Sbjct 876399 TGGATCTTCGCCTTCACG 876416
>seq7521
Length=12184106
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || || || || ||||||||||| |||| ||||||||| | || ||
Sbjct 8321338 CGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 8321279
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||||||||| ||||||||||| ||||||||||| || || ||||||
Sbjct 8321278 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCT 8321219
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| |||||| |||| || || | | || || || |
Sbjct 8321218 TCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGG 8321159
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||||||||| ||||| || || || ||
Sbjct 8321158 GTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTG 8321121
Score = 122 bits (134), Expect = 2e-22
Identities = 139/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| || | ||||||||| | | ||| | ||||| ||||||||||| ||||||||||
Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| ||||||||||| || || ||| ||||| ||||| |||||| |||||| |
Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCT 9381275
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| ||||| || ||||| |||||||| |
Sbjct 9381276 CGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGA 9381335
Query 199620 AAATTTG 199626
|||| ||
Sbjct 9381336 AAATCTG 9381342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178762680999907
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |