Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq7517 152 6e-32 seq7521 131 2e-25 >seq7517 Length=11427604 Score = 152 bits (168), Expect = 6e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||| ||||| ||||||||||| ||||| || |||| || Sbjct 2898492 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCTTCC 2898433 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| ||||| |||||||| || | || | || |||||||||| | Sbjct 2898432 AGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 2898373 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | || | | |||||| || || || |||| ||||||||| ||| Sbjct 2898372 ATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 2898313 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || ||||| ||||| Sbjct 2898312 CCAGTCAGCGTCTTCACGAAGATCTGCAT 2898284 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||| ||||| ||||||||||| | || || |||| || Sbjct 2898720 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCC 2898661 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| ||||| |||||||| || | || | || |||||||||| | Sbjct 2898660 AGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 2898601 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | || | | |||||| || || || |||| ||||||||| ||| Sbjct 2898600 ATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 2898541 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || ||||| ||||| Sbjct 2898540 CCAGTCAGCGTCTTCACGAAGATCTGCAT 2898512 Score = 140 bits (154), Expect = 4e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| | || || |||| || |||||||| |||||||| Sbjct 2898931 CTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCCAGCTGCTTACCGGCGAA 2898872 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| |||||||| || | || | || |||||||||| |||||| ||| | | Sbjct 2898871 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 2898812 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || |||| ||||||||| ||||| |||||||| || || Sbjct 2898811 CTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 2898752 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 2898751 GAAGATCTGCAT 2898740 >seq7521 Length=12184106 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||||||| | || |||||| ||||| ||||||||||| || ||||| | Sbjct 8321332 CGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCA 8321273 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||||||||| |||| |||||||| || | ||| | | |||||| Sbjct 8321272 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCTTCCTTG 8321213 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||||| ||| | || | | ||| || | || || || | || ||| Sbjct 8321212 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 8321153 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 || || ||||| || ||||| || ||||| ||||| ||| || Sbjct 8321152 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAAC 8321111 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || || ||||||||||| |||||||| | || || ||||||||||||||||| | Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||| || | || | || ||||||||| |||||| ||| | || Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCT 9381275 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| | || || || | |||||||| ||||| || || ||||| || | Sbjct 9381276 CGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGA 9381335 Query 46584 AGATTTGCATTTT 46596 | || ||||| || Sbjct 9381336 AAATCTGCATGTT 9381348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565164064084920