Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq236 183 3e-41 >seq236 Length=1144 Score = 183 bits (202), Expect = 3e-41 Identities = 268/378 (71%), Gaps = 6/378 (2%) Strand=Plus/Plus Query 41060 TTTTTATAACGCAATTTCCGATCGCAAACTGTCTCTACCGACTCCAATTATGGCGGGTGT 41119 ||| ||| |||| ||||| |||| | ||||| || || ||||| ||| | || || Sbjct 769 TTTCTATGACGCCATTTCTACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGCGT 828 Query 41120 ACGTACTCCTACGCGCCAGTTCTCCAGTTGTGTAGTAATTGAATCGGGTGATTCTCTTGG 41179 ||||| || || || |||||| | ||||| | || |||| |||||| || | Sbjct 829 GCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTGGA 888 Query 41180 TTCTCTTAACGCTGTAACCTCT---GCGATCGTGAAGTATATTTCACAACGTGCTGGTAT 41236 ||| |||| || ||||| || || ||||| || |||| |||||||| || || Sbjct 889 TTCGATTAATGCC---ACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGAT 945 Query 41237 TGGGGTTAACGCGGGACATATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCTGT 41296 || | |||||||| | || || || ||||| || || ||||| |||||| | Sbjct 946 CGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCCCGATTCGCGGTGGAGAAGCTTT 1005 Query 41297 TCATACTGGTGTGATTCCTTTCTGGAAACATATCCAAACCGCTGTTAAATCCTGTTCACA 41356 ||||| || ||||| |||| || ||| |||| ||||| || |||||||| || || Sbjct 1006 CCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTCTCA 1065 Query 41357 GGGTGGCGTTCGTGGTGGTGCTGCAACACTGTATTATCCTTTCTGGCATCTGGAAGTTGA 41416 ||| ||||| |||||||||||||| || ||| || || | |||||||||||||| || Sbjct 1066 GGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGTCGA 1125 Query 41417 AAACCTTCTGGTGTTGAA 41434 || ||| |||||| |||| Sbjct 1126 AAGCCTGCTGGTGCTGAA 1143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557993807187360