Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_014260.1 Length=172253 Score E Sequences producing significant alignments: (Bits) Value seq236 113 5e-20 >seq236 Length=1144 Score = 113 bits (124), Expect = 5e-20 Identities = 233/347 (67%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 144977 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 145036 |||||| || ||||| |||| ||||||| |||||| || || || | || ||||| Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085 Query 145037 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 145096 || ||||| | || || || || || ||||| || || ||||||||||| || |||| Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025 Query 145097 TGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAAT 145156 ||||| |||||||| |||| || || ||| | ||| ||||| || Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965 Query 145157 CATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATCGAGTTAGC 145216 || ||||||| || || || ||||||| |||| ||||| | || | | | | Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905 Query 145217 AGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTG 145276 || ||||| || | ||| || || ||| || | |||||| || || || || Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845 Query 145277 GCGAGTCGGTGTACGCGCTCCAGCCATAATAGGGGTAGGCAACGAAA 145323 || || || |||||| | |||| ||| || || ||||||| |||| Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAA 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551009125881080