Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq236 208 9e-49 >seq236 Length=1144 Score = 208 bits (230), Expect = 9e-49 Identities = 276/379 (73%), Gaps = 8/379 (2%) Strand=Plus/Plus Query 41110 TTCTATAACGCAATTTCGGATCGT-AAACTGTCATTACCTACGCCTATTATGGCGGGTGT 41168 |||||| |||| ||||| | | | ||| | || | |||||||| || ||| | || || Sbjct 770 TTCTATGACGCCATTTCT-ACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGCGT 828 Query 41169 GCGTACTCCTACGCGTCAGTTCTCCAGTTGTGTTGTAATCGAATCTGGTGATTCTCTGGG 41228 |||||| || || ||||||||| | ||||| | ||||||| ||||||| |||| Sbjct 829 GCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTGGA 888 Query 41229 TTCTCTGAACGCTGTTACGTC---CGCGATCGTGAAATATATCTCTCAACGTGCGGGTAT 41285 ||| | || || || || ||| || |||||||| | || ||||||||||| || Sbjct 889 TTCGATTAATGCC---ACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGAT 945 Query 41286 CGGTGTCAACGCCGGACACATTCGCGCTATGGGTTCAAAAATCCGTGGTGGTGAAGCAGT 41345 ||| ||||||| || | ||| || || ||||| || || ||||| ||||| | Sbjct 946 CGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCCCGATTCGCGGTGGAGAAGCTTT 1005 Query 41346 CCATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACGGCGGTTAAATCTTGTTCCCA 41405 |||||| ||| || ||||||| || || | ||||| || || ||||| || || || Sbjct 1006 CCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTCTCA 1065 Query 41406 GGGTGGCGTTCGTGGTGGTGCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGTTGA 41465 ||| ||||| ||||||||||| || || ||| || ||||| |||||||| ||||| || Sbjct 1066 GGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGTCGA 1125 Query 41466 AAACCTGCTGGTTCTGAAA 41484 || ||||||||| |||||| Sbjct 1126 AAGCCTGCTGGTGCTGAAA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565519217371680