Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_014636.1
Length=225268
Score E
Sequences producing significant alignments: (Bits) Value
seq236 105 1e-17
>seq236
Length=1144
Score = 105 bits (116), Expect = 1e-17
Identities = 233/344 (68%), Gaps = 4/344 (1%)
Strand=Plus/Minus
Query 129127 TTGAGCACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATAGAGTTGCGGCA 129186
|| ||||| || | |||| ||||| || |||||||| ||||| | | || || |||
Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084
Query 129187 CCGCCGCGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGTATTTCCAAAAT 129246
|| || || || || ||||| || ||| ||||| || |||||||| | || | ||
Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024
Query 129247 GGGATAATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGAT-CCCTCGGCACGAAT 129305
|| || |||||||| |||| || | ||||| || | | ||| ||||| ||
Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAAT-CGGGCTACCCAACGCACGGAT 965
Query 129306 -CGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATATAGTCAACGATAGAACTAG 129364
|| |||| |||||||||||| || || |||| | | || | || || | || |
Sbjct 964 GCGGCCCGC-GTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTG 906
Query 129365 CGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAGCTAAACT 129424
||| || || || |||||| || |||||||||||| ||||| ||||| ||||
Sbjct 905 AGGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACT 846
Query 129425 GCCGAGTCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCAGA 129468
| || || || || || || || | | || || || ||||||
Sbjct 845 GACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGA 802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 720634815048480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |