Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_014662.1
Length=165540
Score E
Sequences producing significant alignments: (Bits) Value
seq236 129 6e-25
>seq236
Length=1144
Score = 129 bits (142), Expect = 6e-25
Identities = 257/379 (68%), Gaps = 4/379 (1%)
Strand=Plus/Minus
Query 137961 TTAAGTACGAGGAGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCG 138020
|| || || || ||| | || ||||| || ||||| || || ||| |||| || || ||
Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084
Query 138021 CCACCACGGACTCCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAA 138080
|||||||| || ||||| || || || || || || || || |||| || || ||||
Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024
Query 138081 GGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATC 138140
||||| || ||||| ||||||| || || ||| ||||| ||
Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATG 964
Query 138141 ATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGA--TTCAG 138198
|| ||||| |||||||| || ||||||| || | ||| | ||||| | || ||
Sbjct 963 CGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAG 904
Query 138199 CTGATTTGTTAATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATT 138258
|| | |||| || | ||| ||||||| ||| || | || || || ||||| |
Sbjct 903 GTGGCAT--TAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACT 846
Query 138259 GACGAGTAGGAGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTTCTTAGTTG 138318
|||| || || ||||| | || | ||||||||| || |||||||||||||| || |
Sbjct 845 GACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAG 786
Query 138319 ACACAGCATCATAAAAACG 138337
| | || ||||| |||||
Sbjct 785 AAATGGCGTCATAGAAACG 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529530350980000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |