Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq236 129 6e-25 >seq236 Length=1144 Score = 129 bits (142), Expect = 6e-25 Identities = 257/379 (68%), Gaps = 4/379 (1%) Strand=Plus/Minus Query 137961 TTAAGTACGAGGAGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCG 138020 || || || || ||| | || ||||| || ||||| || || ||| |||| || || || Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084 Query 138021 CCACCACGGACTCCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAA 138080 |||||||| || ||||| || || || || || || || || |||| || || |||| Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024 Query 138081 GGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATC 138140 ||||| || ||||| ||||||| || || ||| ||||| || Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATG 964 Query 138141 ATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGA--TTCAG 138198 || ||||| |||||||| || ||||||| || | ||| | ||||| | || || Sbjct 963 CGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAG 904 Query 138199 CTGATTTGTTAATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATT 138258 || | |||| || | ||| ||||||| ||| || | || || || ||||| | Sbjct 903 GTGGCAT--TAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACT 846 Query 138259 GACGAGTAGGAGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTTCTTAGTTG 138318 |||| || || ||||| | || | ||||||||| || |||||||||||||| || | Sbjct 845 GACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAG 786 Query 138319 ACACAGCATCATAAAAACG 138337 | | || ||||| ||||| Sbjct 785 AAATGGCGTCATAGAAACG 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529530350980000