Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7526 102 1e-16 seq7552 82.4 9e-11 >seq7526 Length=6110091 Score = 102 bits (112), Expect = 1e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 ||||| ||||| || | ||||| || |||||||||||||||||| ||| ||| Sbjct 4673297 CTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCTT 4673238 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | ||| || | ||||| |||||||| || || ||||| || ||| |||||| ||||| Sbjct 4673237 CGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGA 4673178 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| ||||| || ||||| || || ||| || ||||| Sbjct 4673177 GCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGC 4673139 >seq7552 Length=2500597 Score = 82.4 bits (90), Expect = 9e-11 Identities = 116/161 (72%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 |||||| || || || ||||| || ||| | || |||||| || ||| | || || || Sbjct 330235 CTATGGCCGGGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGTGGGCGC 330294 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATG--GA 163663 ||||| | || |||||| |||| | ||| ||| || || ||||||||| || Sbjct 330295 CGGTGTCGTCGACGAGGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCATTCCGA 330354 Query 163664 GACAAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACA 163704 |||||| |||||| || |||| || || ||||||||||| Sbjct 330355 GACAAA--CTTTGAAGTTAAGAAAGGTGATCGCATCGCACA 330393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620660764615120