Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7552 111 2e-19 seq7526 89.7 6e-13 seq7516 82.4 9e-11 >seq7552 Length=2500597 Score = 111 bits (122), Expect = 2e-19 Identities = 130/174 (75%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531 |||||| ||||| || ||||| || ||||| |||||||| ||||| ||| ||| | || Sbjct 330229 AGGATGCTATGGCCGGGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGT 330288 Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591 || || || ||| |||| || || || | ||| ||| || || |||||||| Sbjct 330289 GGGCGCCGGTGTCGTCGACGAGGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCA 330348 Query 158592 TG--GAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTT 158643 | ||||||| ||||||| |||||||| |||||||||||||||||| || || Sbjct 330349 TTCCGAGACAA--ACTTTGAAGTTAAGAAAGGTGATCGCATCGCACAGTTTATT 330400 >seq7526 Length=6110091 Score = 89.7 bits (98), Expect = 6e-13 Identities = 314/480 (65%), Gaps = 14/480 (3%) Strand=Plus/Minus Query 11497 ATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTT 11556 |||| |||||||| || || || || || || || | || || || || || ||||| Sbjct 3350792 ATCTGCCGATCGAAGCGGCCCGGTCGCAGCAGCGCCTTGTCGAGGATGTCCACCCGGTTG 3350733 Query 11557 GTAGCGGCAATGACTACAATGCCAGTC-TCAT--TGTCGAAACCGTCCATTTCTGTGAGA 11613 || ||||| | || || | || || | | ||| ||| |||||||| || || Sbjct 3350732 GTGGCGGCCAGCACGACCA---CATTCGTGGTCGTGTTGAACCCGTCCATCTCCACCAGC 3350676 Query 11614 AGCTGGTTGATCGTCTGTTCAC--GCTCATCGTTGGAGGGCATACCACCTGCCGAA-CGC 11670 |||||||| | || ||||| | |||| || || | | | | ||||| ||| Sbjct 3350675 AGCTGGTTCA--GTGTGTTCTCCTGCTCCGAGT-GGCCGCCGAAGCTTTTGCCGCCGCGC 3350619 Query 11671 TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 || ||||| || || || || |||||||| | || ||||| ||| || ||| Sbjct 3350618 TTTCGTCCGACCGCATCGATTTCGTCGATGAAGAGAATGCACGGCGCGTTCTTGCGGGCC 3350559 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 |||| | || ||||| ||| || ||| || || || ||||| || | || | Sbjct 3350558 ATGGCGAACATGTCGCGTACGCGCGACGGTCCCACGCCGACAAACATTTCCAAAAACTCC 3350499 Query 11791 GCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | | || ||| | ||||||||| || || | || || || |||| ||||| || Sbjct 3350498 GACCCGGA-CACGGTAATGAAGGGTACGTTCGCTTCCCCTGCCGTGGCCTTCGCGAGCAG 3350440 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACT 11909 || ||||||||||| || | || | || | |||||| ||| ||||||||||| Sbjct 3350439 CGTTTTACCCGTACCGGGCGGTCCGGTCAGCATGGCGCCCTTGGGTATCTTGGCACCGAG 3350380 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | | ||| ||| || || |||||||||| |||| |||| || ||| |||||| Sbjct 3350379 ATCGATGTATTGCTGGGGATTTTTGAGGAAGTTGACAAACTCCATAATTTCGATCTTGGC 3350320 >seq7516 Length=3907879 Score = 82.4 bits (90), Expect = 9e-11 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 167506 AGCTTCGTAAAGATGTACCTCGT-CTGAGACGCA-TCCTTGCCACCCATGAGGCGTGTAC 167563 ||| |||| ||||||||||| | ||| ||| |||||||||||| | || || |||| Sbjct 2870255 AGCATCGTGAAGATGTACCTGGGGCTGG--CGCTGTCCTTGCCACCCGTCAGCCGCGTAC 2870198 Query 167564 CAAATTGACCACATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATAATCGTTGGCCA 167623 | || ||||| | || | || ||||||||||| || || || | | |||| Sbjct 2870197 CGAACTGACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCA 2870138 Query 167624 ACTTGACGATCGTTTCAGC-GAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCAGCC 167682 |||| ||||| | ||| ||| || | |||||||| ||||| || |||||| ||| Sbjct 2870137 GGTTGATGATCG-TCGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCC 2870079 Query 167683 ACATATGCTGCCAACTGTGCAACCTTCATCTC 167714 || | | |||| ||| || ||||||| ||| Sbjct 2870078 ACCGAACCGGCCAGCTGGGCCACCTTCACCTC 2870047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588898542293800