Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 140 4e-28
>seq7552
Length=2500597
Score = 140 bits (154), Expect = 4e-28
Identities = 439/672 (65%), Gaps = 15/672 (2%)
Strand=Plus/Plus
Query 105940 GTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGT 105999
||||| |||||| || || || ||||||| || || | |||||||| ||||| || ||
Sbjct 1135282 GTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGT 1135341
Query 106000 TGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAG 106059
||||| || |||| || || || |||| || | | ||| |||||| |
Sbjct 1135342 CGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAA 1135401
Query 106060 AACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTG-AAGCAC 106116
| |||||| | || | | | |||| | |||| |||| || | || |||
Sbjct 1135402 CTCGGCCCAGTTCCACAGATCCG-TCGGTTCCTTGTTCC-ACATCTCGTACTGCAAGATG 1135459
Query 106117 CCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC 106176
|||||| | ||| ||||| | ||||| || | ||| | | ||||| ||
Sbjct 1135460 CCCTTGCT-CACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTC 1135518
Query 106177 ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTT 106236
||||||||| ||||| | ||| || |||||||| || || | ||| | || |
Sbjct 1135519 ACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTG 1135578
Query 106237 GGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAAC 106296
|| || || || | | ||||| || || || |||| || | || || ||
Sbjct 1135579 AGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCAC 1135638
Query 106297 ACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATA 106353
|| | || || || ||||| |||||||| || ||| || ||| ||||||||
Sbjct 1135639 GCCGATCCCGATCGGCCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGCACGGGATA 1135695
Query 106354 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 106413
|||| ||||||| | ||| ||||| || || |||| | || ||| | ||
Sbjct 1135696 GTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAG 1135755
Query 106414 TTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGC 106473
||| || | ||| | || | |||| || ||| || | | |||||| || ||
Sbjct 1135756 CTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGC 1135812
Query 106474 CAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTT 106533
|| |||||| || || ||||||||| | |||||||| |||||| || ||||||||
Sbjct 1135813 CAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCTACAATTTCAGTGCACAAGTT 1135872
Query 106534 GGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTA 106593
||||| || || || || | ||||| |||||||| || ||||| |||||||||||
Sbjct 1135873 GGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTA 1135932
Query 106594 GAGCATGTAGGG 106605
|||||||| ||
Sbjct 1135933 CAGCATGTACGG 1135944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589903210150040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |