Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq7901 93.3 6e-14 >seq7901 Length=80373 Score = 93.3 bits (102), Expect = 6e-14 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 113790 GGTTCAAGTCCTCATGGGCCTGCCAAGTTTGGGGGATTAGCTCAGTTGGAATGAGCGACT 113849 ||||| |||||| | || ||| ||||||||||||||||||||||| | |||| || Sbjct 38405 GGTTCGAGTCCTACCAGACCCACCA-GTTTGGGGGATTAGCTCAGTTGGGA-GAGCACCT 38462 Query 113850 GGTTTGCAACCAGTAGGTCATCGGTTCGACCCCGATATCCTCCACCAATTTTA 113902 | ||||||| ||| |||| ||||||||| |||| ||||||||||| | ||| Sbjct 38463 GCTTTGCAAGCAGGGGGTCGTCGGTTCGATCCCGTCATCCTCCACCATTCTTA 38515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752505823061240