Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq7521 132 1e-25
seq7517 125 2e-23
seq7535 93.3 9e-14
>seq7521
Length=12184106
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| ||||| ||||| |||| ||||| | ||||| || |||||||| || ||||||||
Sbjct 9381158 TTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATC 9381217
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||| ||||||||||| ||||| || || ||| ||| || |||||
Sbjct 9381218 AGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCG 9381277
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||||||| || || ||||| || | ||||| || || | ||||| |||||
Sbjct 9381278 ATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAA 9381337
Query 195133 ACTTGCAT 195140
| |||||
Sbjct 9381338 ATCTGCAT 9381345
>seq7517
Length=11427604
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| ||||| || || || ||||| |||| ||||| | || ||||| |||||||||||
Sbjct 2898480 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCTTCCAGCTGCTTACCG 2898421
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|||||||| | || || || |||||||||||||| || ||||| || || || |||
Sbjct 2898420 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTC 2898361
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|||||||| || |||||||| || || || || || | ||||| || |||| ||
Sbjct 2898360 ACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTC 2898301
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 2898300 TTCACGAAGATCTGCAT 2898284
Score = 120 bits (132), Expect = 7e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
|| ||||| || || || ||||| |||| |||| || | || ||||| |||||||||||
Sbjct 2898708 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAG-GTACGTCCGTCTTCCAGCTGCTTACC 2898650
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|||||||| | || || || |||||||||||||| || ||||| || || || |||
Sbjct 2898649 GGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 2898590
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|||||||| || |||||||| || || || || || | ||||| || |||| ||
Sbjct 2898589 CACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGT 2898530
Query 195123 TTTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 2898529 CTTCACGAAGATCTGCAT 2898512
Score = 120 bits (132), Expect = 7e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
|| ||||| || || || ||||| |||| |||| || | || ||||| |||||||||||
Sbjct 2898936 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAG-GTACGTCCGTCTTCCAGCTGCTTACC 2898878
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|||||||| | || || || |||||||||||||| || ||||| || || || |||
Sbjct 2898877 GGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 2898818
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|||||||| || |||||||| || || || || || | ||||| || |||| ||
Sbjct 2898817 CACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGT 2898758
Query 195123 TTTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 2898757 CTTCACGAAGATCTGCAT 2898740
>seq7535
Length=3646130
Score = 93.3 bits (102), Expect = 9e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || ||||| || || || || || || || || || | || || | ||||| ||
Sbjct 876281 AACCAGATGAAGGGTCGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 876340
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || |||||||| || || || || ||||| || || || || ||||| ||
Sbjct 876341 CAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 876400
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099
|| || ||| ||||||||||| || ||||| || ||||| |||
Sbjct 876401 GATCTTCGCCTTCACGTTCTCAATCGTATCCGATGGCTCAACTTCGAGG 876449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109332041533607
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |