Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq7551 123 2e-23 >seq7551 Length=2192847 Score = 123 bits (136), Expect = 2e-23 Identities = 236/342 (69%), Gaps = 8/342 (2%) Strand=Plus/Minus Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 ||| |||||||| || || ||||||| || || | ||||||||||| ||||||||||| Sbjct 1924025 TAGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGG 1923966 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 29987 || || || || | ||| |||| | || || | ||||||||| |||||||| || || Sbjct 1923965 CACGCCCAGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACT 1923906 Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG--AGGCCCAAGTCTTTG 30045 ||| ||||||| || | |||||| || || || |||||| ||| | || Sbjct 1923905 AACGAAAAACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGG--AATATCAGAA 1923848 Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 || ||||| ||||||| |||||| || | || | || |||||| | || ||| | Sbjct 1923847 GGATTCCAAGCGCACATGATGATTCGACGATCGTAGGGATTGTTCTTAATTTTGTCGATC 1923788 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACT 30163 | | ||||||||| | ||| || | ||| || | | | ||||| |||| Sbjct 1923787 ACTTCAGCCAGCTGATCTATTCCCTGACCTGTGTAATC-GTCGTGGCATGT-TTTGTAGG 1923730 Query 30164 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30205 || || || || | |||||| ||||| || ||||| |||| Sbjct 1923729 TGGCACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCA 1923688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408565205135933