Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq7551 123 2e-23
>seq7551
Length=2192847
Score = 123 bits (136), Expect = 2e-23
Identities = 236/342 (69%), Gaps = 8/342 (2%)
Strand=Plus/Minus
Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927
||| |||||||| || || ||||||| || || | ||||||||||| |||||||||||
Sbjct 1924025 TAGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGG 1923966
Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 29987
|| || || || | ||| |||| | || || | ||||||||| |||||||| || ||
Sbjct 1923965 CACGCCCAGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACT 1923906
Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG--AGGCCCAAGTCTTTG 30045
||| ||||||| || | |||||| || || || |||||| ||| | ||
Sbjct 1923905 AACGAAAAACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGG--AATATCAGAA 1923848
Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105
|| ||||| ||||||| |||||| || | || | || |||||| | || ||| |
Sbjct 1923847 GGATTCCAAGCGCACATGATGATTCGACGATCGTAGGGATTGTTCTTAATTTTGTCGATC 1923788
Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACT 30163
| | ||||||||| | ||| || | ||| || | | | ||||| ||||
Sbjct 1923787 ACTTCAGCCAGCTGATCTATTCCCTGACCTGTGTAATC-GTCGTGGCATGT-TTTGTAGG 1923730
Query 30164 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30205
|| || || || | |||||| ||||| || ||||| ||||
Sbjct 1923729 TGGCACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCA 1923688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408565205135933
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |