Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_018088.1
Length=104936
Score E
Sequences producing significant alignments: (Bits) Value
seq236 215 3e-51
>seq236
Length=1144
Score = 215 bits (238), Expect = 3e-51
Identities = 251/339 (74%), Gaps = 0/339 (0%)
Strand=Plus/Plus
Query 71158 CCAACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAG 71217
|| || || || ||| ||| || ||||| ||||| | || || || ||||| |
Sbjct 806 CCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTG 865
Query 71218 ATTGACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTAT 71277
|| || |||| |||||||| ||||| ||||||||| | ||||| | ||||| || ||
Sbjct 866 ATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCATTGTGAAATAC 925
Query 71278 GTATCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCT 71337
|| ||| ||||||| || ||||| ||||| | ||| || ||||| || || || ||
Sbjct 926 GTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCCCG 985
Query 71338 ATACGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACA 71397
|| ||| ||| ||||| | ||||| || | || || |||| ||||||||||| ||
Sbjct 986 ATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACC 1045
Query 71398 GCAGTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCT 71457
|| || ||||| ||||||||||| ||| | |||||||||||||| || |||||||||
Sbjct 1046 GCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCG 1105
Query 71458 ATGTGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAA 71496
||||||||| | ||||| |||||||| | || |||||
Sbjct 1106 ATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTGAAA 1144
Score = 84.2 bits (92), Expect = 1e-11
Identities = 183/274 (67%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 70552 GTAACAAAACGTGATGGTGGATTAGCACCTTTGGATTTAGATAAGATCCATAAAGTAATC 70611
||||| ||||| ||||| | || || | || | || || ||||| || |||
Sbjct 203 GTAACTAAACGCGATGGCCGTAAAGAACGCATCAATCTCGACAAAATCCACCGGGTCATC 262
Query 70612 GCATGGGCTGCAGAGGGACTTGAAAATGTCTCAGTATCTCAAGTTGAATTGAAATCTCAT 70671
| ||||| ||||| || | | || ||||| ||||||||||| || ||| || |||
Sbjct 263 GATTGGGCCGCAGAAGGTTTACACAACGTCTCGGTATCTCAAGTAGAGTTGCGTTCACAT 322
Query 70672 ATCCAATTTTATGAAGGTATGAAGACAGAAGATATTCACGAAATAATCATTAAAGCAGCA 70731
|| || || || || || || || || | |||||||| |||| || || ||||| ||
Sbjct 323 ATTCAGTTCTACGACGGCATCAAAACCGCCGATATTCATGAAACTATTATCAAAGCGGCT 382
Query 70732 GCAGATTTAATATCGGTTGACACTCCTGATTATCAGTATCTCTCATCTCGTTTAGCCGTA 70791
|| ||| | || || || | || || ||||||||||| | | || || || |
Sbjct 383 GCCGATCTGATCTCCCGCGATGCGCCAGACTATCAGTATCTGGCCGCGCGCTTGGCGATC 442
Query 70792 TTTCATTTACGTAAACAAGCCTATGGTGATTTTG 70825
|| || | || ||| |||| || || | ||||
Sbjct 443 TTCCACCTGCGCAAAAAAGCTTACGGCCAGTTTG 476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335627358767857
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |