Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq236 192 4e-44 >seq236 Length=1144 Score = 192 bits (212), Expect = 4e-44 Identities = 282/399 (71%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 68405 ACGCGTCTGGAGATGGTTAAGGGCTTCTACGATGTGACCAGTACATTCAAGTTGTCTCTG 68464 ||||||||||| || ||| | ||||| || | | ||| ||||| | |||||| Sbjct 746 ACGCGTCTGGATTATGTAAAGCGTTTCTATGACGCCATTTCTACCTTCAAAATTTCTCTG 805 Query 68465 CCAACGCCAATTATGGCCGGCGTGCGCACCCCTACTCGCCAGTTCTCCAGCTGCGTGCTG 68524 || |||||||| ||| | |||||||| || || || || |||||| | ||| |||||| Sbjct 806 CCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTG 865 Query 68525 ATTGAAGCTGCTGATAGTCTGAAAGGGATTAGCGCTGCGTCTTCCGCAATCATCGACTAC 68584 || ||| || |||||| ||| | ||||| || | || ||| || | | ||| Sbjct 866 ATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCATTGTGAAATAC 925 Query 68585 GTGTCACGTCGCGCGGGCATTGGTATTGGCTTTGGGCGTCTGCGTGCGCTGGGCAGTGAG 68644 || || | || ||||| || || || | || || | |||||| |||| || | Sbjct 926 GTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCCCG 985 Query 68645 ATCCGCAATGGCGAGGCCACCCACACTGGCGTTTTTCCATTCCTGAAACACTTCCAGACG 68704 || ||| ||| || || ||| || ||| |||| ||| || || |||||||| Sbjct 986 ATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACC 1045 Query 68705 GCGGTGAAATCCTGCTCTCAGGGCGGTGTTCGCGGCGGCGCTGCTACAGCGTTCTATCCG 68764 || || |||||||||||||||||||| || || || || ||||| || |||||| ||| Sbjct 1046 GCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCG 1105 Query 68765 ATCTGGCACTTGGAAGTTGAAAGTCTGCTGGTGCTGAAA 68803 || ||||| ||||||| ||||| ||||||||||||||| Sbjct 1106 ATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTGAAA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330389630460060