Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_018855.1
Length=169158
Score E
Sequences producing significant alignments: (Bits) Value
seq236 111 2e-19
>seq236
Length=1144
Score = 111 bits (122), Expect = 2e-19
Identities = 256/382 (67%), Gaps = 8/382 (2%)
Strand=Plus/Plus
Query 131909 CGTTTTTATGATGCCGTTTCTACTCATCAAG-TTTCATTGCCTACTCCAATTATGGCAGG 131967
||||| ||||| ||| ||||||| | |||| |||| ||||||| ||||| ||| | ||
Sbjct 767 CGTTTCTATGACGCCATTTCTAC-CTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGG 825
Query 131968 TGCTCGTACTCCAACTCGCCAGTTCTCTAGTTGTGTAGTTATTGAAGCCGGTGATTCGTT 132027
| ||||| ||||| || |||||| ||||| | || ||| |||||| |
Sbjct 826 CGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCT 885
Query 132028 AAAATCTATTAACAAAACTTCAGCATCAATTATTGAATATATTTCTAAACGAGCTGGTAT 132087
| || ||||| || ||| | ||| | |||| |||| |||| || || ||
Sbjct 886 GGATTCGATTAATGCCACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGAT 945
Query 132088 AGGTATCAACGTTGGTATGCTTCGTGCAGAAGGTTCTAAGAT---CGGTATGGGTGAAGT 132144
|| ||||||| || | ||||| ||| ||| |||| || ||||
Sbjct 946 CGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCCCGATTCGCGGT---GGAGAAGC 1002
Query 132145 TCGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTC 132204
| ||||| || ||||| |||| || |||||||| || || |||||||| || ||
Sbjct 1003 TTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTC 1062
Query 132205 TCAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGT 132264
||| || || | |||||||||||||| || || || ||||||||||| | |||||
Sbjct 1063 TCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGT 1122
Query 132265 AGAGAACCTATTAGTTCTGAAA 132286
|| | ||| | || ||||||
Sbjct 1123 CGAAAGCCTGCTGGTGCTGAAA 1144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541106428380880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |