Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 273 4e-68
seq7526 154 3e-32
seq7514 95.1 2e-14
>seq7552
Length=2500597
Score = 273 bits (302), Expect = 4e-68
Identities = 873/1328 (66%), Gaps = 72/1328 (5%)
Strand=Plus/Plus
Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960
|| ||| |||| || | |||||| || || || ||||| | ||| | ||||| ||| ||
Sbjct 1135229 AGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGAC 1135288
Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020
||||| ||||||| || ||||| || ||||| ||||| ||| || || |||||
Sbjct 1135289 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 1135348
Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCC 213080
|| |||| ||| || || | | ||||||| | |||| | | ||| |||
Sbjct 1135349 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 1135408
Query 213081 CAGTCCCATCTGCCAGACAGGTCC-TCG--TCCTTCACGTTCCACATGTCAAACTGCAAG 213137
|||| ||| ||| ||| ||| ||||| ||||||||| || ||||||||
Sbjct 1135409 CAGTTCCA---------CAGATCCGTCGGTTCCTT---GTTCCACATCTCGTACTGCAAG 1135456
Query 213138 ATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTC-CTTGGCCAG 213196
||||| |||||||| || ||||||| ||| | ||| || |||| ||| |||||
Sbjct 1135457 ATGCCCTTGCTCACCGGACTGCCCTCGTACGTCTCGTACGGACCAT-CTCGAGCGGCCAA 1135515
Query 213197 CTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTT 213256
||| ||| ||| | ||| || |||||||||||||||| ||||| | | || |||||
Sbjct 1135516 CTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTT 1135575
Query 213257 CTTGGCCTC------TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAG 213310
| ||||| | | ||| || |||||| || |||| |||| ||||
Sbjct 1135576 TTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGAT------GAACGCATCGGCCAT 1135629
Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACTCCTC 213367
||||| || ||||| ||||| || ||||| | || || || ||| ||| ||||
Sbjct 1135630 GCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTT--AGC-CTCCGG 1135686
Query 213368 CAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGAC 213427
|| ||| || | ||| || ||||| ||||| || ||||| || | || | |||
Sbjct 1135687 CACGGGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGAC 1135746
Query 213428 ATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAG 213484
| ||| | | | | | |||| ||| ||| |||||| ||
Sbjct 1135747 TTCCTTCAGCT--TTGCAAAGTCATACGT----TTTGTCTTGCTTTACAAACATGTTCAA 1135800
Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCACC---TCCTGAGAGTCTGTGTACTCCATGAT 213541
|||||| |||||| ||||| || || ||| |||| || | |||||| | ||
Sbjct 1135801 GGCGATCGAGGCCAGATTGCATACCGCTACCTCATCCTTCGA---CGAGTACTCTACAAT 1135857
Query 213542 CTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGAC-TTTGCG- 213599
|| ||||||| |||| ||| ||||||||| | ||||| ||||| || ||| ||
Sbjct 1135858 TTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTT--ACTTTTACGA 1135915
Query 213600 TTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATC 213659
||| || ||||||||| |||||||| || ||||| || | ||| || | | |||
Sbjct 1135916 TTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATC 1135975
Query 213660 TGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTA 213718
||| || | |||| ||||| ||| |||| | | ||| | | | ||||||
Sbjct 1135976 GCAAACCACAGAT-CCTGCGCCTTCACCTGCCGCAT-AAAGCGACCCTCTT--TCTCGTA 1136031
Query 213719 CTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGAC-AGG 213774
| ||| |||| | ||| || | ||||||| ||||| || || |||| |
Sbjct 1136032 CCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAG---GTGTCCGATAGCCCGGGACAATC 1136088
Query 213775 ATGCGGGACACATGAGGCTCCA-GTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCC 213833
|||||| ||||| || ||||| | | || ||| || | ||||||||||||||||
Sbjct 1136089 GTGCGGG-CACATCAGACTCCACATTTCGTTCGCCTC-CACACGCTGCATGAACAGGTCC 1136146
Query 213834 GGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTG 213893
|| | ||| || ||| |||| ||||| | | ||| ||| || | ||||||
Sbjct 1136147 GGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTC 1136206
Query 213894 CGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCG 213953
|||||| ||||| || || || || | ||||||||||| | |||||||| || ||
Sbjct 1136207 TTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCT 1136266
Query 213954 CCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGG 214010
|| |||| | ||||| ||||| || || || ||| ||||| ||| ||||||
Sbjct 1136267 CCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGC 1136326
Query 214011 ACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTC 214070
| || ||||| ||||| || ||||| || || | || |||| || || |
Sbjct 1136327 ATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGG 1136386
Query 214071 AGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTC 214130
| | || | || || ||||||||||| |||| || || | ||| || || ||
Sbjct 1136387 ATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTC 1136446
Query 214131 ACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAG 214190
| || || |||||| | ||||| || || | | | ||| || ||||||| |||
Sbjct 1136447 AGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAA 1136506
Query 214191 AGCTGGGG 214198
||||||||
Sbjct 1136507 AGCTGGGG 1136514
>seq7526
Length=6110091
Score = 154 bits (170), Expect = 3e-32
Identities = 283/414 (68%), Gaps = 3/414 (1%)
Strand=Plus/Plus
Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012
||||| |||| || || |||| ||||| | ||||| || ||||||||| |
Sbjct 4672961 CAGCAAACGATCGGCCACAAACTCAATGTACTGCGACATCAGATCACAGTTCATGCCCAG 4673020
Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072
| ||| |||| ||||| || || ||||||| ||| ||| | || || || | |
Sbjct 4673021 CATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCAGGACCGCATCGCGGAT 4673080
Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132
|||| | | ||||| || || || || | ||| | |||| | | || |||
Sbjct 4673081 GATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGA---ACATCAGGCA 4673137
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
||||||||| | ||||| |||||||| || ||| ||| |||| |||||| ||| ||
Sbjct 4673138 GGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCC 4673197
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
||||| | || | || || |||||||| || || ||||| || |||||||||
Sbjct 4673198 CGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAAGAAGAT 4673257
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
||||| || || ||||| || || || ||| || || || |||||| |||||
Sbjct 4673258 ACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCTCGAGAT 4673317
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
|||| ||||||||||| |||||| ||| | ||| |||| ||| || |||||
Sbjct 4673318 CCAGTTCAGCGCCCAGTCCGCCTTCCGCTTCACGCACGGCAGCGTTTCGATGGC 4673371
Score = 116 bits (128), Expect = 7e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
||||||||| ||||||||| || || || |||||||| ||||||||| | |||||
Sbjct 4673529 GTACATCTCGCTGTGCACATTTTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCCTC 4673588
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
|||||||| || | ||| | |||| ||||||||| || || || || || ||
Sbjct 4673589 CGTAACCTGCACCTCCTGGCTGAAGCGTTCCACCAGATTCTCGTTCACGATACCGTCGGA 4673648
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| ||||||||||| || || || || ||| ||||| ||| | | | || | |
Sbjct 4673649 CGCGGCAAAGAAGGCCAGCACGTGGGAAATGAAGTGGCGTTCGCTCGGTTTCAGCGACTC 4673708
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
|||| ||| | || ||| ||| || || |||||||| ||||| ||||| ||
Sbjct 4673709 CCAGTCCTTCATATCCTTGGACAGATCAACCTCTTCCACCGTCCAAAAGGAAGC 4673762
>seq7514
Length=7993369
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548
||| ||| ||||||| ||||||||| || |||||| || || || ||| |||||
Sbjct 5478300 CTTCAGCTCCTTCACCCGGTCCTCCAGCTTCGAGATGCGCTCGAGCTTCCGCTTCCGGCA 5478359
Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608
|||| ||| || | |||||||| || | ||| || ||| ||||||||| |||||
Sbjct 5478360 CTTGGAGGCGGCGACCCGGTTCCGCAGCCGCTTGCGCTCCAGCTTGATGCGCTCCTGCGA 5478419
Query 241609 CTCCATGTCGATCGG 241623
|||||||||||||||
Sbjct 5478420 CTCCATGTCGATCGG 5478434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931410291792640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |