Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 197 3e-45
seq7526 129 1e-24
>seq7552
Length=2500597
Score = 197 bits (218), Expect = 3e-45
Identities = 653/997 (65%), Gaps = 40/997 (4%)
Strand=Plus/Plus
Query 221510 TCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GC 221568
||||||| ||||| || ||||| ||||| |||||||| | | | ||||| ||| ||
Sbjct 1135622 TCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGA-GCGCTTAGC 1135680
Query 221569 TTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628
|| ||||||||||| | ||||| || || | ||||| || || | || | | ||
Sbjct 1135681 CTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTT 1135740
Query 221629 AACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTC 221688
| | || || ||||||| || | || || ||| || | ||
Sbjct 1135741 AGCGACTTCCTTCAGCTT--------TGCA----AAGTCATA--CGTTTTGTCTTGCTTT 1135786
Query 221689 CACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGT 221748
||||| ||| | ||| | |||||| || || || || ||||| ||||| |
Sbjct 1135787 -ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGA 1135845
Query 221749 ATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808
|||| || || || || || | |||| || |||||||| || | | | || ||
Sbjct 1135846 GTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTT 1135905
Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868
| || |||||| ||| |||||||| ||||| | || |||| || |||| ||| |
Sbjct 1135906 ACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGA 1135965
Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGG 221927
| | ||| ||| || || ||| || ||||| || | | | ||||||
Sbjct 1135966 TTCGATGATCGCAAACCACAGATC-CTGCGCCTTCACCTGCCGCATAAAGCGACCCTCTT 1136024
Query 221928 TCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987
||| | ||||| || || ||| | || |||| ||| || | | || || || |
Sbjct 1136025 TCT---CGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGG 1136081
Query 221988 GACACCTG-GCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAG 222046
|||| | ||||| |||||||||||||| | ||| | | || | |||||||||
Sbjct 1136082 GACAATCGTGCGGG-CACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGCATGAAC 1136140
Query 222047 AGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGT 222104
|||||||| ||||| || || | || | || || || ||| | ||||||| ||||
Sbjct 1136141 AGGTCCGGTATCCAGAGTGC--GTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGG 1136198
Query 222105 TGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGG 222164
|||||||| ||||||| | |||||| || || ||| | ||||||||||| ||||||| ||
Sbjct 1136199 TGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGG 1136258
Query 222165 CCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGA 222224
| | || || || |||||||||||||||||||| || || || | |||| |||
Sbjct 1136259 CGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGA 1136318
Query 222225 TGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGC 222284
||| || |||| ||||| ||||| || ||||| || || ||||||| ||
Sbjct 1136319 CGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCT 1136378
Query 222285 CGGCCCTCAGGTTACTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGG 222341
|| | || ||| | ||| || ||||| |||||||| || || || | ||
Sbjct 1136379 TCGCGC---GGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGG 1136435
Query 222342 CGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAA 222401
| || ||| || ||||| ||||||||| || || || | | ||| ||| |
Sbjct 1136436 CACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGA 1136495
Query 222402 AACAAGACGACATCT---GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGT 222458
| || ||||| | || || | |||| | | || ||||| || || |||||
Sbjct 1136496 AGCAGGACGAAAGCTGGGGACGCTGAGTGG--CCGCCG-CAAACATAGTTGGCGAGGCGT 1136552
Query 222459 GTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTC 222495
| |||||||| | | |||| ||||| ||| |||||
Sbjct 1136553 GGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTC 1136589
>seq7526
Length=6110091
Score = 129 bits (142), Expect = 1e-24
Identities = 185/260 (71%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 25775 AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGT 25834
|||||| || ||||| ||||||||| | || || | ||| |||||||| |
Sbjct 4673389 AGAGAGTTC--CTGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGCGGAAGGCGGACT 4673332
Query 25835 GGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894
|||| |||| |||||| ||| ||| || | |||||||||||| | || || || |
Sbjct 4673331 GGGCGCTGAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCG 4673272
Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954
|||| || ||||| ||||| ||||||||| || || || ||||||||||| ||| ||
Sbjct 4673271 CTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGC 4673212
Query 25955 AGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCC 26014
|| ||||| || || ||| || |||||||| ||| | ||||| || || |
Sbjct 4673211 GTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGC 4673152
Query 26015 ACAGAGATTTTGCCTGCCTG 26034
|| | || ||||||||||||
Sbjct 4673151 ACTGCGACTTTGCCTGCCTG 4673132
Score = 113 bits (124), Expect = 8e-20
Identities = 164/228 (72%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCCA 25570
||||| | |||||| |||||||| ||||||| ||| | | |||| | |||| | ||
Sbjct 4673753 TGGACGGTGGAAGAGGTTGATCTGTCCAAGGATATGAAGGACTGGGAGTCGCTGAAACCG 4673694
Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630
| ||| | || || | ||||| |||| |||||||| || || || ||||| |
Sbjct 4673693 AG--CGAACGCCACTTCATTTCCCACGTGCTGGCCTTCTTTGCCGCGTCCGACGGTATCG 4673636
Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGTG 25688
|||||||||||||| || | |||| | ||| |||||| |||| ||||| ||
Sbjct 4673635 TGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGGTTACG--GAGGCGCGCTG 4673578
Query 25689 TTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736
|||||||| |||||||| || || |||||||||||| ||| ||||
Sbjct 4673577 CTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGATGTA 4673530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928722645298240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |