Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq236 113 5e-20 >seq236 Length=1144 Score = 113 bits (124), Expect = 5e-20 Identities = 233/347 (67%), Gaps = 0/347 (0%) Strand=Plus/Plus Query 94847 TTTCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTT 94906 |||| | || || || || ||| |||| | ||||| ||||||||||| || || || | Sbjct 798 TTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCT 857 Query 94907 GTGTGGTTATTGAAGCAGGCGACTCACTGAAATCTATTAACAAAACTGCTAACTCAATAA 94966 ||||| | || ||| || || ||| | || ||||| || | | | | || Sbjct 858 GTGTGCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCATTG 917 Query 94967 TTGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAG 95026 | ||||| |||| ||||||| || || || ||||||| || || ||||| | Sbjct 918 TGAAATACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGG 977 Query 95027 GTTCTCGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATT 95086 || | ||| || || |||| |||||||| ||||| |||| || |||| Sbjct 978 GTAGCCCGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATT 1037 Query 95087 TCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTT 95146 ||||||| || || ||||| || || || || || | ||||| || ||||| || | Sbjct 1038 TCCAGACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGT 1097 Query 95147 ATTATCCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAA 95193 || || || |||||| ||||||| |||| ||||| || |||||| Sbjct 1098 TCTACCCGATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTGAAA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537612487938160