Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq236 91.5 2e-13 >seq236 Length=1144 Score = 91.5 bits (100), Expect = 2e-13 Identities = 232/353 (66%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 119946 TTCAATACAAGCAGTTTCTCAACCTCCAAATGCCACATAGGGTAATTCAGAGTAGCAGAG 120005 |||| || ||||| | || || |||| ||||||||| ||||| || || |||| Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084 Query 120006 CCGCCACGTAGAGCACCTTGCGAACAGCTCTTAACCGCAGTATGGAAGTGCTTGTAGAAT 120065 || ||||| | | || || || ||| || || || || ||||| ||||||||||| Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024 Query 120066 GGGATTACGCCGGTATGGGTTGCTTCGCCGTTGCGAATTGGTGAACCCTCCGCACGAATA 120125 || || |||||||||| ||||| || |||||| || |||| |||||| || Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATG 964 Query 120126 GCACCAGCATTAATACCAATACCAGCACGTTGACTGATATAACTAATAATAGATGCAGAC 120185 || || || || || || || |||||||| | || | | ||| | || Sbjct 963 CGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAG 904 Query 120186 GTATCGTTAATAGATTTCAGAGAATCGCCGGATTCAATTTTCACACACGAACTAAATTGG 120245 || | ||||| || | ||| ||| || |||| || |||||| || || || || Sbjct 903 GTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTGA 844 Query 120246 CGCGTTGGGGTGCGGGCACCACCCAAAATAGGGGTTGGGATTGAAATCTTAAA 120298 || ||||| || || | ||| || || || || || | ||||| || || Sbjct 843 CGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAA 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741352090109480