Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq236 140 3e-28 >seq236 Length=1144 Score = 140 bits (154), Expect = 3e-28 Identities = 221/314 (70%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 73412 TCTTCCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGT 73471 ||| || || || || ||| | || || ||||| || |||||||||||||| |||||||| Sbjct 802 TCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGT 861 Query 73472 CCTGATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGA 73531 |||||| || |||||| | |||||| || || || || || | | |||| || | Sbjct 862 GCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCATTGTGAA 921 Query 73532 CTATGTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGC-TATCCGTGGGATTGGCA 73590 || || ||| |||| || || |||||| || ||| |||| | ||||||| | | || | Sbjct 922 ATACGTTTCCCAACGTGCGGGGATCGGCATCAACG-CGGGCCGCATCCGTGCGTTGGGTA 980 Query 73591 GTCCTATTCGCGGCGGAGAGATGGTTCACACAGGCCTGATCCCATTCATCAAGTATCTCA 73650 | || |||||||| ||||| | || || ||| || || ||| |||| || || Sbjct 981 GCCCGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCC 1040 Query 73651 CTGGGGCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAACAGCGTACA 73710 || | || || ||||| ||||||||| | ||||||||||| || || || | Sbjct 1041 AGACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCT 1100 Query 73711 TCCCTCTGTGGCAT 73724 ||| |||||||| Sbjct 1101 ACCCGATGTGGCAT 1114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510601640669440