Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_019925.1 Length=152427 Score E Sequences producing significant alignments: (Bits) Value seq236 125 7e-24 >seq236 Length=1144 Score = 125 bits (138), Expect = 7e-24 Identities = 217/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 51491 TGCCACAGGGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGAC 51550 ||||||| ||| | || || || ||||| || || | ||||||||||||||| || Sbjct 1113 TGCCACATCGGGTAGAACAACGTGGCAGCACCACCACGCACGCCGCCCTGAGAGCAGGAT 1054 Query 51551 TTGAGCGCCCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTGTGAACCATCTCTCCG 51610 || | || || || |||| |||||| || ||| || || | ||||| Sbjct 1053 TTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATGCAGCCGGTATGGAAAGCTTCTCCA 994 Query 51611 CCGCGAATAGGACTACCAATACCACGGATT-GCCCCGAAGTCGAAACCGATACCAGCGCG 51669 |||||||| || ||||| | ||||||| | |||| || || ||||| || || || Sbjct 993 CCGCGAATCGGGCTACCCAACGCACGGATGCGGCCCGC-GTTGATGCCGATCCCCGCACG 935 Query 51670 TTTTGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACC 51729 || || || || | || |||| | | || || || || || |||||| | ||||| Sbjct 934 TTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCATTAATCGAATCCAGGCTATCACC 875 Query 51730 AGTCTTGATCAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGAT 51789 | | ||||| |||||| ||||||||||||||||| || ||||| || || | |||||| Sbjct 874 ACATTCGATCAGCACACAGGAGCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGAT 815 Query 51790 CGGGGTTGGAAGA 51802 || || || ||| Sbjct 814 TGGCGTAGGCAGA 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487574269454920