Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_020080.1
Length=174413
Score E
Sequences producing significant alignments: (Bits) Value
seq236 178 1e-39
>seq236
Length=1144
Score = 178 bits (196), Expect = 1e-39
Identities = 267/378 (71%), Gaps = 6/378 (2%)
Strand=Plus/Plus
Query 40423 TTTTTATAACGCAATTTCCGATCGCAAACTGTCTCTACCGACTCCAATTATGGCGGGTGT 40482
||| ||| |||| ||||| |||| | ||||| || || ||||| ||| | || ||
Sbjct 769 TTTCTATGACGCCATTTCTACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGCGT 828
Query 40483 ACGTACTCCTACGCGCCAGTTCTCCAGTTGTGTAGTAATTGAATCGGGTGATTCTCTTGG 40542
||||| || || || |||||| | ||||| | || |||| |||||| || |
Sbjct 829 GCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTGGA 888
Query 40543 TTCTCTTAACGCTGTAACCTCT---GCGATCGTGAAGTATATTTCACAACGTGCTGGTAT 40599
||| |||| || ||||| || || ||||| || |||| |||||||| || ||
Sbjct 889 TTCGATTAATGCC---ACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGAT 945
Query 40600 TGGGGTTAACGCGGGACATATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCTGT 40659
|| | |||||||| | || || || ||||| || || ||||| |||||| |
Sbjct 946 CGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCCCGATTCGCGGTGGAGAAGCTTT 1005
Query 40660 TCATACTGGTGTGATTCCTTTCTGGAAACATATTCAAACCGCTGTTAAATCCTGTTCACA 40719
||||| || ||||| |||| || ||| | || ||||| || |||||||| || ||
Sbjct 1006 CCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTCTCA 1065
Query 40720 GGGTGGCGTTCGTGGTGGTGCTGCAACACTGTATTATCCTTTCTGGCATCTGGAAGTTGA 40779
||| ||||| |||||||||||||| || ||| || || | |||||||||||||| ||
Sbjct 1066 GGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGTCGA 1125
Query 40780 AAACCTTCTGGTGTTGAA 40797
|| ||| |||||| ||||
Sbjct 1126 AAGCCTGCTGGTGCTGAA 1143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557920216866680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |