Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_020416.1
Length=160221
Score E
Sequences producing significant alignments: (Bits) Value
seq236 138 1e-27
>seq236
Length=1144
Score = 138 bits (152), Expect = 1e-27
Identities = 264/389 (68%), Gaps = 0/389 (0%)
Strand=Plus/Minus
Query 133859 ACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 133918
|||| |||| |||| || || ||||||||||| || || | | || || |||||||||
Sbjct 1137 ACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCACCACCA 1078
Query 133919 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 133978
|| || ||||| ||||| || |||||||| || ||||| ||||| || |||| |||||
Sbjct 1077 CGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATG 1018
Query 133979 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 134038
||| ||||| |||| ||| | ||| || || || || ||
Sbjct 1017 CAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCC 958
Query 134039 GCGTTGATGCCGATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTTGCCGCA 134098
|||||||||||||| || || || | | | || || | ||| | | | |||
Sbjct 957 GCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCA 898
Query 134099 TTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTA 134158
||||| |||| ||| ||| ||| ||| || | ||||| || || |||||||| ||
Sbjct 897 TTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTGACGGGTT 838
Query 134159 GGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGGCGAGTAGATACAGCA 134218
|| ||||| | || | ||| || || ||||||| ||||| | | ||||| | ||
Sbjct 837 GGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGAAATGGCG 778
Query 134219 TCATAAAAACGAATAATATGAGCCAGACG 134247
||||| ||||| | | || | |||||||
Sbjct 777 TCATAGAAACGCTTTACATAATCCAGACG 749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512511789427960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |