Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq236 138 1e-27 >seq236 Length=1144 Score = 138 bits (152), Expect = 1e-27 Identities = 264/389 (68%), Gaps = 0/389 (0%) Strand=Plus/Minus Query 133859 ACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 133918 |||| |||| |||| || || ||||||||||| || || | | || || ||||||||| Sbjct 1137 ACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCACCACCA 1078 Query 133919 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 133978 || || ||||| ||||| || |||||||| || ||||| ||||| || |||| ||||| Sbjct 1077 CGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATG 1018 Query 133979 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 134038 ||| ||||| |||| ||| | ||| || || || || || Sbjct 1017 CAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCC 958 Query 134039 GCGTTGATGCCGATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTTGCCGCA 134098 |||||||||||||| || || || | | | || || | ||| | | | ||| Sbjct 957 GCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCA 898 Query 134099 TTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTA 134158 ||||| |||| ||| ||| ||| ||| || | ||||| || || |||||||| || Sbjct 897 TTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTGACGGGTT 838 Query 134159 GGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGGCGAGTAGATACAGCA 134218 || ||||| | || | ||| || || ||||||| ||||| | | ||||| | || Sbjct 837 GGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGAAATGGCG 778 Query 134219 TCATAAAAACGAATAATATGAGCCAGACG 134247 ||||| ||||| | | || | ||||||| Sbjct 777 TCATAGAAACGCTTTACATAATCCAGACG 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512511789427960