Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq7526 93.3 6e-14
seq7901 91.5 2e-13
>seq7526
Length=6110091
Score = 93.3 bits (102), Expect = 6e-14
Identities = 230/345 (67%), Gaps = 3/345 (1%)
Strand=Plus/Plus
Query 47963 AAGTT-TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATT 48021
||||| || || || | || || || ||||| || || || ||| | ||||| ||||
Sbjct 5337020 AAGTTCTCCCCCCGGCGCGGCGACTCGTGATTGAACAGGATGCCATTGCAGGCGAACATG 5337079
Query 48022 CCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATA 48080
|||| | ||| |||||||| | || ||||||||||| || | | ||| |||| | ||
Sbjct 5337080 TCGTACGCTTCGCGATAGTTGATCACAATCCAGTACCCGTACA-TCTTGGCACACGCGTA 5337138
Query 48081 AGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATA 48140
|| || || |||||||| || || | || | || || || || |||||| || ||
Sbjct 5337139 CGGTGAGCGGGGATAGAACGGGGTCTTTTCGTTTTGGGGCGTTTCCGCCACCTTGCCGTA 5337198
Query 48141 AAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGAC 48200
|| || || ||||| || |||| || ||| | ||| | | | | |||||
Sbjct 5337199 CAGCTCGGACGTCGATGCCTGGTAGAAGCGGACCGTCCGCTCCTGCCCTACCGTACGGAT 5337258
Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260
|| || |||| | || || || | ||||| || | || |||||| || ||
Sbjct 5337259 GGCATCGAGCAGCCGGAGCGTACCGACCGCATCCACCTCCGCCGTGTACTCGCTCAGATC 5337318
Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305
||||||| ||| || || ||||| || | ||||| || || ||
Sbjct 5337319 GAACGAAATCTTCACGTGGCTCTGGGCGGCCAGATTGTATATTTC 5337363
>seq7901
Length=80373
Score = 91.5 bits (100), Expect = 2e-13
Identities = 86/110 (78%), Gaps = 5/110 (5%)
Strand=Plus/Minus
Query 53741 TGGAGAATAACGGACTCGAACCGTTGACATCCTACTTGCAAAGCAGGCGCTCTACCAACT 53800
||||| || |||| |||||||| ||| ||| ||||||||||||| ||||| ||||||
Sbjct 38506 TGGAGGATGACGGGATCGAACCGACGACCCCCTGCTTGCAAAGCAGGTGCTCTCCCAACT 38447
Query 53801 GAGCTAATTCCCCAA-----TCGGGGTGGCAGGGATCGAACCTGCGACCC 53845
|||||||| |||||| | || ||| ||| |||||||| ||||||
Sbjct 38446 GAGCTAATCCCCCAAACTGGTGGGTCTGGTAGGACTCGAACCTACGACCC 38397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665406879167720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |