Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 129 7e-25
>seq7552
Length=2500597
Score = 129 bits (142), Expect = 7e-25
Identities = 456/704 (65%), Gaps = 15/704 (2%)
Strand=Plus/Minus
Query 75891 TCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGA 75950
|| |||| ||| ||| || || ||| || ||||| |||||||||||||| || |
Sbjct 1135970 TCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTGCAATCGTA 1135911
Query 75951 AGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAG 76010
| |||||||| ||||| | || || ||||| | || || | ||||| |||||| |||
Sbjct 1135910 AAAGTAACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCACTGAAATTGTAG 1135851
Query 76011 AGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGT 76070
||||| | ||||||||| || || |||||| |||| || |||||| | | ||
Sbjct 1135850 AGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGCCTTGAACATGT 1135791
Query 76071 ATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTG 76130
||| || |||| | || | ||| | || ||| || | ||| || | |||| |
Sbjct 1135790 TTGTAAAGCAAGACA---AAACGTATGACTTTGCAAAGCTGAAGGAAGTCGCTAAGACCG 1135734
Query 76131 TTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGC 76187
| || ||||| ||| | ||||||| |||| |||||||| ||| || ||
Sbjct 1135733 TAACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTGCCGGAGGCTAAGC 1135674
Query 76188 GAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTAT 76247
| || |||||||| ||||| || || || | || || || || | || |||| |
Sbjct 1135673 G---CTCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAGGGCATGGCCGATGCGT 1135617
Query 76248 TTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCT 76307
| || || ||||| | | || || || || | || | ||| | || |
Sbjct 1135616 TCATCCTGATGCGCTATCCGTACGAAAGCGAAGAGGCTCAAAAGCTAAATCAGCAAATAT 1135557
Query 76308 TTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTT 76367
| |||||||| || ||| | ||||| ||||| ||||| ||||| | | |||
Sbjct 1135556 TCGAAACCATCTACTACGGCGCGCTGGAAGCGAGCTGTGAGTTGGCCGCTCGAGATGGTC 1135497
Query 76368 CCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGG 76426
| || ||||| | ||||| ||| | | |||||| ||| |||| || |||| |
Sbjct 1135496 CGTACGAGACGTACGAGGGCAGTCCGGTG-AGCAAGGGCATCTTGCAGTACGAGATGT-G 1135439
Query 76427 GAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGA 76484
||| | |||| | | | || | |||||| | | |||||| ||| ||
Sbjct 1135438 GAACAAGGAACCGA-CGGATCTGTGGAACTGGGCCGAGTTGAAGGAAAAGATCGCCAAGC 1135380
Query 76485 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 76544
| || |||| || || || |||| || ||||| || || ||||| ||||||||
Sbjct 1135379 ACGGCATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCCACGGCACAAATTC 1135320
Query 76545 TGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588
| || || ||||||| || || || ||||| | ||| | |||
Sbjct 1135319 TCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTAC 1135276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596491143640480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |