Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7552 129 7e-25 >seq7552 Length=2500597 Score = 129 bits (142), Expect = 7e-25 Identities = 456/704 (65%), Gaps = 15/704 (2%) Strand=Plus/Minus Query 75891 TCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGA 75950 || |||| ||| ||| || || ||| || ||||| |||||||||||||| || | Sbjct 1135970 TCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTGCAATCGTA 1135911 Query 75951 AGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAG 76010 | |||||||| ||||| | || || ||||| | || || | ||||| |||||| ||| Sbjct 1135910 AAAGTAACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCACTGAAATTGTAG 1135851 Query 76011 AGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGT 76070 ||||| | ||||||||| || || |||||| |||| || |||||| | | || Sbjct 1135850 AGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGCCTTGAACATGT 1135791 Query 76071 ATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTG 76130 ||| || |||| | || | ||| | || ||| || | ||| || | |||| | Sbjct 1135790 TTGTAAAGCAAGACA---AAACGTATGACTTTGCAAAGCTGAAGGAAGTCGCTAAGACCG 1135734 Query 76131 TTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGC 76187 | || ||||| ||| | ||||||| |||| |||||||| ||| || || Sbjct 1135733 TAACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTGCCGGAGGCTAAGC 1135674 Query 76188 GAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTAT 76247 | || |||||||| ||||| || || || | || || || || | || |||| | Sbjct 1135673 G---CTCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAGGGCATGGCCGATGCGT 1135617 Query 76248 TTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCT 76307 | || || ||||| | | || || || || | || | ||| | || | Sbjct 1135616 TCATCCTGATGCGCTATCCGTACGAAAGCGAAGAGGCTCAAAAGCTAAATCAGCAAATAT 1135557 Query 76308 TTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTT 76367 | |||||||| || ||| | ||||| ||||| ||||| ||||| | | ||| Sbjct 1135556 TCGAAACCATCTACTACGGCGCGCTGGAAGCGAGCTGTGAGTTGGCCGCTCGAGATGGTC 1135497 Query 76368 CCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGG 76426 | || ||||| | ||||| ||| | | |||||| ||| |||| || |||| | Sbjct 1135496 CGTACGAGACGTACGAGGGCAGTCCGGTG-AGCAAGGGCATCTTGCAGTACGAGATGT-G 1135439 Query 76427 GAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGA 76484 ||| | |||| | | | || | |||||| | | |||||| ||| || Sbjct 1135438 GAACAAGGAACCGA-CGGATCTGTGGAACTGGGCCGAGTTGAAGGAAAAGATCGCCAAGC 1135380 Query 76485 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 76544 | || |||| || || || |||| || ||||| || || ||||| |||||||| Sbjct 1135379 ACGGCATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCCACGGCACAAATTC 1135320 Query 76545 TGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 | || || ||||||| || || || ||||| | ||| | ||| Sbjct 1135319 TCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTAC 1135276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596491143640480