Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq236 221 8e-53 >seq236 Length=1144 Score = 221 bits (244), Expect = 8e-53 Identities = 244/325 (75%), Gaps = 0/325 (0%) Strand=Plus/Plus Query 9243 AAATCTCCCTCCCGACACCAATCATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCT 9302 |||| || || || || |||||||||||||| || ||||| || ||||| || ||||||| Sbjct 795 AAATTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCT 854 Query 9303 CATGCGTAAAAATCGAAAGCGGTGATAGCCTAAAATCAATCAATGCAACATCAGGCGCAA 9362 | || || |||||| | ||||||||||| | || || ||||| || ||| |||| | Sbjct 855 CCTGTGTGCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCA 914 Query 9363 TCGTGAGTTACGTTTCACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCAT 9422 | |||| |||||||| || ||||| || || ||||| |||||||| || ||||| || | Sbjct 915 TTGTGAAATACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGT 974 Query 9423 TAGGTTCTGAGATTCGTGGTGGTGAAGCGGTACATACTGGTTGTATCCCATTCTACAAAC 9482 | ||| |||||| ||||| ||||| | ||||| || || || || |||||||| | Sbjct 975 TGGGTAGCCCGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGC 1034 Query 9483 ACTTCCAAACAGCAGTGAAATGTTGTAGCCAAGGCGGTGTTCGTGGCGGCGCGGCAACGG 9542 | ||||| || || || |||| || || ||||| || ||||| || || || ||| Sbjct 1035 ATTTCCAGACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGT 1094 Query 9543 TATTCTACCCAATGTGGCACCTAGA 9567 | |||||||| |||||||| || || Sbjct 1095 TGTTCTACCCGATGTGGCATCTGGA 1119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342928822419899