Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7552 120 9e-22 seq7521 116 1e-20 >seq7552 Length=2500597 Score = 120 bits (132), Expect = 9e-22 Identities = 152/204 (75%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 155545 CATAGTCAAATGTTTTATCCTCATTTACAAACATAC-CAAGACCAATAGACGCCAGATTA 155603 || ||||| | ||||| || | ||||||||||| |||| | | | || |||||||| Sbjct 1135761 CAAAGTCATACGTTTTGTCTTGCTTTACAAACATGTTCAAGGCGA-TCGAGGCCAGATTG 1135819 Query 155604 CATACCGCAGTCTCCTTGT-CGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACT 155662 |||||||| ||| | | || || ||| |||||||| ||| ||||| ||| |||| Sbjct 1135820 CATACCGCTACCTCATCCTTCGACGA-GTACTCTACAATTTCAGTGCACAAGTTGGAACA 1135878 Query 155663 CTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAAT 155722 ||||||||||| | ||||| ||||||| ||||| || |||||||||||||| || || Sbjct 1135879 TTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCAT 1135938 Query 155723 GTATGGGGTTCCTGTCTCCATCTG 155746 ||| || || || |||| ||| Sbjct 1135939 GTACGGTACGCCGGTTTCCACCTG 1135962 >seq7521 Length=12184106 Score = 116 bits (128), Expect = 1e-20 Identities = 188/265 (71%), Gaps = 8/265 (3%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| ||||||||||| || ||||| ||| | ||||| || || ||| Sbjct 10898536 TCCATAGCCTTGATCAAACGACGCTGGATGTAACCGGTTTCGGCCGTTTTGACGGCAGTA 10898477 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || | ||| ||||||||||||| || |||||| | | ||| ||| ||| ||||| Sbjct 10898476 TCGATCAAACCTTCACGACCACCCATGGCGTGGAAGTAGAACTCGGTCGG-CGTCAGCCC 10898418 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 ||| | || | || ||||| ||||| | |||||| || ||||||| |||| | Sbjct 10898417 GGCAAGGTACGAATTTTCCACGAACCCACGAGACTCGGGACCGTAATCGTC---CTTGAT 10898361 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| ||||| || | || | ||| | || || ||||| || || |||||||| Sbjct 10898360 GAAGTGCGGCAGTGTGCGTTTGCGGAAACCGAACGGAATGCGCTTACCCTCGACGTTCTG 10898301 Query 302811 CTGTCCCAGGCACGAAATCATCTGC 302835 || || | || | ||| | |||| Sbjct 10898300 TTGGCCTACACAAGCAATAACCTGC 10898276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471619198527577