Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_021344.2
Length=176227
Score E
Sequences producing significant alignments: (Bits) Value
seq236 199 4e-46
>seq236
Length=1144
Score = 199 bits (220), Expect = 4e-46
Identities = 375/543 (69%), Gaps = 15/543 (3%)
Strand=Plus/Plus
Query 41456 TTCTCTTACGCTGGTGTTCAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCACAAAC 41515
||||| ||||| | || |||||||| |||||||| ||| ||||| | ||| | |
Sbjct 611 TTCTCCTACGCGGCAGTCAAGCAGTTGGAAGGGAAATACCTGGTGCAGAACCGCGTCAGC 670
Query 41516 GGTGACATCTACGAAACCCCGCAATACGCTTTCATGCTGATTGCTATGTGTCTGCA-TCA 41574
||||| |||||||| | | | || | | | || ||| | || || ||| ||
Sbjct 671 GGTGAGATCTACGAGAGCGCCCAGTTCCTGTATATTCTGGTCGCCGCCTGCCTGTTCTCT 730
Query 41575 GGACGAACCGCGAACCCTGAGCGCATTTA-ATCATGTGGTTGATTTCTACAACGCAATTT 41633
|| | | ||||| || ||| | | || |||| |||||| |||| ||||
Sbjct 731 GG-CTATCCGCGCGCCA----CGCGTCTGGATTATGTAAAGCGTTTCTATGACGCCATTT 785
Query 41634 CGGATCGT-AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGT 41692
| | | | || | || | |||||||| || ||| |||| |||||||| || || |||
Sbjct 786 CT-ACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGT 844
Query 41693 CAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTA 41752
||||| | || || |||| |||| |||||| |||| ||| | |||||
Sbjct 845 CAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCC--- 901
Query 41753 ACCTCT---GCGATCGTGAAGTATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGA 41809
||||| || || ||||| || |||| |||||||| || ||||| | ||||| ||
Sbjct 902 ACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGC 961
Query 41810 CATATTCGCGCGATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATC 41869
| || || ||| ||||| || || ||||| ||||| | ||||| ||| ||
Sbjct 962 CGCATCCGTGCGTTGGGTAGCCCGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATT 1021
Query 41870 CCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGT 41929
||||||| || ||| | ||||| || || |||||||| || || || || || ||||||
Sbjct 1022 CCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGT 1081
Query 41930 GGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTG 41989
|||||||| ||||||| || ||||| |||||| ||||||| |||| ||||||||| |||
Sbjct 1082 GGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTG 1141
Query 41990 AAA 41992
|||
Sbjct 1142 AAA 1144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563724253462920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |