Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq236 199 4e-46 >seq236 Length=1144 Score = 199 bits (220), Expect = 4e-46 Identities = 375/543 (69%), Gaps = 15/543 (3%) Strand=Plus/Plus Query 41456 TTCTCTTACGCTGGTGTTCAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCACAAAC 41515 ||||| ||||| | || |||||||| |||||||| ||| ||||| | ||| | | Sbjct 611 TTCTCCTACGCGGCAGTCAAGCAGTTGGAAGGGAAATACCTGGTGCAGAACCGCGTCAGC 670 Query 41516 GGTGACATCTACGAAACCCCGCAATACGCTTTCATGCTGATTGCTATGTGTCTGCA-TCA 41574 ||||| |||||||| | | | || | | | || ||| | || || ||| || Sbjct 671 GGTGAGATCTACGAGAGCGCCCAGTTCCTGTATATTCTGGTCGCCGCCTGCCTGTTCTCT 730 Query 41575 GGACGAACCGCGAACCCTGAGCGCATTTA-ATCATGTGGTTGATTTCTACAACGCAATTT 41633 || | | ||||| || ||| | | || |||| |||||| |||| |||| Sbjct 731 GG-CTATCCGCGCGCCA----CGCGTCTGGATTATGTAAAGCGTTTCTATGACGCCATTT 785 Query 41634 CGGATCGT-AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGT 41692 | | | | || | || | |||||||| || ||| |||| |||||||| || || ||| Sbjct 786 CT-ACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGT 844 Query 41693 CAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTA 41752 ||||| | || || |||| |||| |||||| |||| ||| | ||||| Sbjct 845 CAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCC--- 901 Query 41753 ACCTCT---GCGATCGTGAAGTATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGA 41809 ||||| || || ||||| || |||| |||||||| || ||||| | ||||| || Sbjct 902 ACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGC 961 Query 41810 CATATTCGCGCGATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATC 41869 | || || ||| ||||| || || ||||| ||||| | ||||| ||| || Sbjct 962 CGCATCCGTGCGTTGGGTAGCCCGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATT 1021 Query 41870 CCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGT 41929 ||||||| || ||| | ||||| || || |||||||| || || || || || |||||| Sbjct 1022 CCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGT 1081 Query 41930 GGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTG 41989 |||||||| ||||||| || ||||| |||||| ||||||| |||| ||||||||| ||| Sbjct 1082 GGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTG 1141 Query 41990 AAA 41992 ||| Sbjct 1142 AAA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563724253462920