Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7552 419 2e-112 seq7521 136 4e-27 seq7517 123 2e-23 seq7535 118 1e-21 >seq7552 Length=2500597 Score = 419 bits (464), Expect = 2e-112 Identities = 1181/1790 (66%), Gaps = 49/1790 (3%) Strand=Plus/Plus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 || || || ||||||| || |||| |||| || || || | |||||| ||||| || Sbjct 1134890 TTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCA 1134949 Query 138214 GTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGT 138273 ||||| ||||| | | |||| | || | || ||||| || || | || | || Sbjct 1134950 GTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGC 1135009 Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 | ||| | ||||| |||||||| ||||||||| || ||||| ||||| |||| Sbjct 1135010 TCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGGCC 1135069 Query 138334 ATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGT 138393 || || || | |||| |||||||| || || ||||| ||||| ||||| | Sbjct 1135070 ATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTTCC 1135129 Query 138394 CGCGGTATTGTTGCAATATTTTGAAT-GCTCCC--GTTGGCCGCAATGATGCGATTTCTC 138450 ||||||| | ||||| ||||| || | ||| ||||| | ||| | || | | || Sbjct 1135130 TGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAAT--TTCGTTCT-TC 1135186 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 ||||| | ||||| || ||| |||| || | | |||| ||| | ||| Sbjct 1135187 ATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACC 1135246 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 || || || || | || || || | | ||||| ||| ||| | ||||| |||||| Sbjct 1135247 TGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGAT 1135306 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || ||||| || ||||| || ||||||| || |||||||| |||| || || ||| Sbjct 1135307 TCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAA 1135366 Query 138631 TTCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 || || | ||||| |||| || |||||| | | | ||||| ||||| ||| Sbjct 1135367 TTGCGAATGCCGTG---CTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCC 1135423 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 | |||| ||||||||||| |||||||| || || ||| || | |||||||| ||| Sbjct 1135424 GTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCTCG 1135483 Query 138748 TACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACCATA 138806 |||| ||||| ||| | ||| || |||||||| |||||| || ||||| || || Sbjct 1135484 TACGTCTCGTACGGACC-ATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTA 1135542 Query 138807 GTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCAT 138866 ||| || |||||| || |||||||| ||| | | ||||| |||| |||||||| Sbjct 1135543 GTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATA 1135602 Query 138867 GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCG 138926 ||| | || ||||||| ||||||| || |||||||| | |||| || | ||||| Sbjct 1135603 GCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCG 1135662 Query 138927 CAGATTTGA-CGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTGTT 138983 || ||| || ||||| | || || | ||||| || || ||||| ||||||||||| Sbjct 1135663 CATATTGGAGCGCTT---AGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTT 1135719 Query 138984 TAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT-CAAAATCGTATGTGCCCC 139042 | ||| ||| || ||||| || | | || | | || |||| || || || Sbjct 1135720 CAGATTGCGCGTTACGGTCTTAG-CGACTTCCTTCAGCTTTGCAAAGTCATACGT----- 1135773 Query 139043 CGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCG 139102 ||||| | | ||||| |||| | |||||||| | ||||| |||| Sbjct 1135774 -TTTGTCTT------GCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCG 1135826 Query 139103 CCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 | || || | | | || ||| || |||||||| | ||||| || ||| ||||| Sbjct 1135827 CTACCTCATCCTTCGACG-AGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATG 1135885 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 || || | ||| || || || ||||| || || |||||||| ||||| ||||| |||||| Sbjct 1135886 GTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGT 1135945 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGA 139281 ||| |||||||| || | || || || ||| ||| || | | || Sbjct 1135946 ACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGC 1136005 Query 139282 CGCACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGT 139339 |||| |||| | | || ||||||| ||| || | ||||| ||| || Sbjct 1136006 CGCA--TAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCC 1136063 Query 139340 AGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCT 139399 ||| ||| || || || |||| | || || ||||| || ||| | ||||||||| Sbjct 1136064 AGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCT 1136123 Query 139400 TGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCT 139459 || ||| ||||||||| ||||| ||||| | ||| | | || || || || Sbjct 1136124 CCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGA 1136183 Query 139460 TATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATG 139519 || ||| || |||| |||| | || || || || | ||| | ||||| | Sbjct 1136184 CCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACG 1136243 Query 139520 GTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTA 139576 | || ||||||||||| | ||| || ||| |||||||| |||||||||| ||| Sbjct 1136244 GCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTG 1136303 Query 139577 CAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTAC 139636 | | ||| ||| | ||||||| ||||||| |||||||| ||| | ||||| || | | Sbjct 1136304 CCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTAC--C 1136361 Query 139637 GGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAA 139694 ||| | ||| | || |||| || || || | ||||| || ||| | | Sbjct 1136362 GGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1136421 Query 139695 TTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753 || || |||| | || | || | | || ||||| || || ||||| || || Sbjct 1136422 CTTTGAAATTAGGGCACACT-GCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGG 1136480 Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813 ||| || | ||| ||||| |||||||| || || | | ||| | || ||||||| || Sbjct 1136481 ACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAG 1136540 Query 139814 TAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCA 139873 | || ||||| || || | | |||| || | ||| || ||||| || Sbjct 1136541 TTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCAT 1136600 Query 139874 CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGG 139923 | || ||| || ||||| || | || || ||||||||||| || ||| Sbjct 1136601 CGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGG 1136650 >seq7521 Length=12184106 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 8321117 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 8321176 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| |||||||| || || ||||| Sbjct 8321177 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCGCCAGATCA 8321236 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | |||| || || || Sbjct 8321237 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAA 8321296 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || || ||||| |||| ||||||| || Sbjct 8321297 CATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 8321344 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || || || || || | | Sbjct 9381345 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 9381286 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| ||||| || || || ||||| Sbjct 9381285 GACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 9381226 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || |||||||||||| | | | || || || ||| Sbjct 9381225 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAC 9381166 Query 24884 ATTCAAAAGG 24893 ||||| |||| Sbjct 9381165 ATTCAGAAGG 9381156 >seq7517 Length=11427604 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || ||||| || || || | | Sbjct 2898512 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 2898571 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| ||||| Sbjct 2898572 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 2898631 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| ||||| || |||||||| || | | | |||| || || ||| Sbjct 2898632 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGTACCTTGTCCGACTACAAC 2898691 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| | |||||||| | || ||||||| ||| Sbjct 2898692 ATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGCGGTGGC 2898739 Score = 122 bits (134), Expect = 8e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 || |||||||||||| | || ||||| || || || || || ||||| || || || | Sbjct 2898280 TAGGATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCC 2898339 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 | ||||| | || | || || |||||||| ||||| || || || ||||| || Sbjct 2898340 GTCGGACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGA 2898399 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 ||| || ||||||||||| ||||| || |||||||| || | | |||| || || Sbjct 2898400 TCAGCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTA 2898459 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || ||||| ||||| | |||||||| | || ||||||| ||| Sbjct 2898460 CAACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGCGGTGGC 2898511 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || ||||| || || || | | Sbjct 2898740 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 2898799 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| ||||| Sbjct 2898800 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 2898859 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| ||||| || |||||||| || | | | |||| || || ||| Sbjct 2898860 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGTACCTTGTCCGACTACAAC 2898919 Query 24884 ATTCAAAAGGAATCGAC 24900 || || ||||| ||||| Sbjct 2898920 ATCCAGAAGGAGTCGAC 2898936 >seq7535 Length=3646130 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || || ||||| || |||| | Sbjct 876034 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTGGAAGTTGA-GCCATC 875976 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | | || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 875975 GGATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 875916 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | | |||| || ||||| Sbjct 875915 GCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAA 875856 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || || |||| | || |||| || ||| Sbjct 875855 CATCCAGAAGGAGTCTACTCTTCATCTGGTTCTTCGTCTGCGTGGTGGC 875807 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || ||||| || || |||| | Sbjct 876262 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGA-GCCATC 876204 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | | || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 876203 GGATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 876144 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| || || || |||||||||||| | | | |||| || ||||| Sbjct 876143 GCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAA 876084 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || || |||| | || |||| || || Sbjct 876083 CATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGTCTGCGTGGTGG 876036 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || ||||| || || ||||| || ||| ||||||| || || || Sbjct 876406 AAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCTGGAAAG 876347 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 |||||||||||| | | | |||| || |||||||| || ||||||||||| || || Sbjct 876346 CAGCTGGAGGATGGCCGCACCCTGTCGGACTATAACATCCAGAAGGAATCGACCCTTCAT 876287 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 |||| | || |||| || || Sbjct 876286 CTGGTTCTCCGTCTGCGTGGTGG 876264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449838432841880