Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7539 167 2e-36 >seq7539 Length=3454454 Score = 167 bits (184), Expect = 2e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 |||||||| || ||||||||||| || |||||||| |||||||| | ||||| || || Sbjct 2512918 TGCGTTTGAGCTCCCAGCTCGCAGCCAAAGTACTTCGTCGGGTAGGTTGCCGGGCGGCCG 2512859 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| || | |||| |||||| ||||| || |||||||||||||| ||||| || Sbjct 2512858 ATCGCGCGCGCCACATCGGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCCTTACCC 2512799 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || ||||| ||| |||||| ||||| ||||| |||||||| ||| | ||||||||| Sbjct 2512798 TCTACCTTCGCGTTGATGCGGGGCATCTTGTACCGGTAGAAGATGTCGGTCACATTGCGA 2512739 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || |||||||| || |||| Sbjct 2512738 TTCACGTTCACGGTAGCCAT 2512719 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || | ||||| ||||| | ||| || | | |||| ||||| | Sbjct 2513226 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTCACCTCGAGCGGCCCGTGGAA 2513167 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||||||||| |||| | ||| || | || ||||| || || || Sbjct 2513166 GCCGCACGCCTTGCAGCCCTGCGAGATCGTACCCTTCTTGGACGAGACGATCAGATCCGT 2513107 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||||||||| || ||||| |||| |||||||||||||||||| || || |||||||| Sbjct 2513106 CTCCGGGTTGTCGCACTCCGGGCACAGCACAAACTTGCGGATGAACCCGTCGAGCAGGTC 2513047 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| | | ||||| || ||||| || ||||| |||||||| Sbjct 2513046 CTGCAGCTTGGCCGCATCGTGCGAACCGTTCACAATGAAGCGTTCGTT 2512999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412788663514853