Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq7539 167 2e-36
>seq7539
Length=3454454
Score = 167 bits (184), Expect = 2e-36
Identities = 157/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503
|||||||| || ||||||||||| || |||||||| |||||||| | ||||| || ||
Sbjct 2512918 TGCGTTTGAGCTCCCAGCTCGCAGCCAAAGTACTTCGTCGGGTAGGTTGCCGGGCGGCCG 2512859
Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563
| ||| || | |||| |||||| ||||| || |||||||||||||| ||||| ||
Sbjct 2512858 ATCGCGCGCGCCACATCGGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCCTTACCC 2512799
Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623
|| ||||| ||| |||||| ||||| ||||| |||||||| ||| | |||||||||
Sbjct 2512798 TCTACCTTCGCGTTGATGCGGGGCATCTTGTACCGGTAGAAGATGTCGGTCACATTGCGA 2512739
Query 34624 TTAACGTTCACAGTCCCCAT 34643
|| |||||||| || ||||
Sbjct 2512738 TTCACGTTCACGGTAGCCAT 2512719
Score = 154 bits (170), Expect = 1e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262
||||||||| || | ||||| ||||| | ||| || | | |||| ||||| |
Sbjct 2513226 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTCACCTCGAGCGGCCCGTGGAA 2513167
Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322
||||| || ||||||||||| |||| | ||| || | || ||||| || || ||
Sbjct 2513166 GCCGCACGCCTTGCAGCCCTGCGAGATCGTACCCTTCTTGGACGAGACGATCAGATCCGT 2513107
Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382
|||||||||||| || ||||| |||| |||||||||||||||||| || || ||||||||
Sbjct 2513106 CTCCGGGTTGTCGCACTCCGGGCACAGCACAAACTTGCGGATGAACCCGTCGAGCAGGTC 2513047
Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
||| | ||| | | ||||| || ||||| || ||||| ||||||||
Sbjct 2513046 CTGCAGCTTGGCCGCATCGTGCGAACCGTTCACAATGAAGCGTTCGTT 2512999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412788663514853
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |