Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq7540 192 9e-43
seq7524 132 8e-25
seq10210 123 4e-22
seq7531 111 2e-18
seq7526 111 2e-18
seq7518 111 2e-18
seq7552 107 3e-17
seq7517 102 1e-15
>seq7540
Length=5191166
Score = 192 bits (212), Expect = 9e-43
Identities = 187/241 (78%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| | |
Sbjct 3197077 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGGA 3197136
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| ||||| || |||||||||||||||| ||| ||| ||||||||| |
Sbjct 3197137 GCAACAGTCGCACCGCCGTCTGGATCTCGCGGGACGTGATGGTGGAGCGCTTGTTGTAGT 3197196
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| || || | |||| || |||| |||||||| || || |||||
Sbjct 3197197 GCGCCAGGCGGGACGCTTCCGCCGCGATCCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 3197256
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| ||| ||||| ||| |||||||||||||| ||||||||||
Sbjct 3197257 TGATGCTCATCGCCTTGGAGGAAATGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGT 3197316
Query 1485710 A 1485710
|
Sbjct 3197317 A 3197317
>seq7524
Length=14321806
Score = 132 bits (146), Expect = 8e-25
Identities = 245/355 (69%), Gaps = 6/355 (2%)
Strand=Plus/Minus
Query 2019047 GGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCT-CTTGGGCGCGGCCGCCGACG 2019105
||| || || |||| |||| |||||||| ||| | || || |||| | | ||| ||
Sbjct 11824064 GGGTAAAACGACGACCATCCTCTGCCTGGCACGCATCCTGCTCGGGCCCAACTTCCG-CG 11824006
Query 2019106 AGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCA 2019165
||||||| || || || || || || | |||||||| | || || || || || | |
Sbjct 11824005 AGGCCGTACTTGAGCTGAACGCTTCCAATGAGCGCGGTATCGATGTGGTACGCAGCAAGA 11823946
Query 2019166 TCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCAT 2019223
|||| | ||| | || | | || ||||| | |||||| |||||| | | ||
Sbjct 11823945 TCAAAATGTTTGCGCAACAGAAGGTAACG--CTGCCCCGCGGCCGGCACAAGATTGTAAT 11823888
Query 2019224 CCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGA 2019283
||| || || || ||| || | ||| || |||||||||||| || || || |||||
Sbjct 11823887 CCTGGACGAAGCGGACAGCATGACGGAGGGGGCCCAGCAGGCGCTGCGGCGAACGATGGA 11823828
Query 2019284 AAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGA 2019343
|| || | |||||||||||| |||||||| ||||| || ||| | | |||||||
Sbjct 11823827 AATCTATAGCAACACGACGCGCTTTGCGCTAGCCTGTAATACGAGCGAAAAGATCATCGA 11823768
Query 2019344 AGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398
| | ||||| ||| || || || ||||||| || ||| |||| ||||||
Sbjct 11823767 ACCGATCCAGTCCCGGTGTGCGATGCTGCGCTTCTCGAAGCTCTCCGATGCCCAG 11823713
>seq10210
Length=6988
Score = 123 bits (136), Expect = 4e-22
Identities = 172/241 (71%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| ||||| ||||| || || || |||||||||||| |||| || || || |||
Sbjct 720 TGTACTTTGTGACAGCCTTCGTTCCTTCGGAGACGGCGTGCTTGGCAAGCTCACCAGGCA 779
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| || || ||||| ||||| ||||||| |||||| |||||||| |
Sbjct 780 GCAGCAGACGAACAGCGGTTTGGATTTCGCGGGACGTGATCGTCGAACGCTTGTTGTAGT 839
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||| |||| ||||| | | ||||| |||| || |||||||| || |||||
Sbjct 840 GCGCCAAGCGGGATGCCTCAGCAGCAATGCGTTCGAAGATATCGTTGACGAAACTGTTCA 899
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | || |||||||| || ||||| || ||||| | ||| ||||
Sbjct 900 TGATGCTCATGGCCTTCGAAGAGATGCCAGTATCCGGGTGGACTTGCTTCAACACTTTGT 959
Query 1485710 A 1485710
|
Sbjct 960 A 960
>seq7531
Length=2383904
Score = 111 bits (122), Expect = 2e-18
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| ||||||||||| ||||| ||||||| | ||| |||| ||||| |
Sbjct 715150 GAAAAGCGCACCGATGACATCAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAGGGC 715209
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
||||| || ||| ||||||| ||||| ||||| || ||||||||| || || || ||
Sbjct 715210 ACCCTGTTCGAGCTGATCCTGGCCGCGAACTATCTGGACATCAAGGGGCTGCTGGACGTG 715269
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
||||| || ||||| ||| | ||||||||||| | || || || || ||||| ||
Sbjct 715270 ACCTGCAAAACGGTGGCGAACATGATCAAGGGCAAAACCCCGGAAGAGATTCGCAAAACG 715329
Query 2035746 TTTAACATCAAGTACG 2035761
|| ||||||||| |||
Sbjct 715330 TTCAACATCAAGAACG 715345
>seq7526
Length=6110091
Score = 111 bits (122), Expect = 2e-18
Identities = 158/220 (72%), Gaps = 7/220 (3%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
||||||||||| ||||| ||||| ||| ||| || ||||| ||||| ||||||
Sbjct 4673157 CCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCCACGCTTC 4673216
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| ||||| ||||| || ||| || || ||| ||||| ||||| || || || ||
Sbjct 4673217 TTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAAGAAGATACCCTCAACCGCAGCGAAT 4673276
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCC 794518
| |||| |||||| || ||||| |||| |||| | |||||| |||| |||||
Sbjct 4673277 GCCACGACCCGCTC-GCCAAAGT----TGGCCTTCTTGCTCGAGATCCAGTTCAGCGCCC 4673331
Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558
| || ||||| | |||| | |||| ||| ||||||||
Sbjct 4673332 AGTCCGCCTTCCGCTTCACGCACGGCAGCGTTTCGATGGC 4673371
Score = 91.5 bits (100), Expect = 2e-12
Identities = 158/225 (70%), Gaps = 10/225 (4%)
Strand=Plus/Plus
Query 793997 CTTCTCGCACCCGAGC--GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCAC 794054
||||||||| || ||| || ||| ||| || ||||| || || ||||||||||| ||
Sbjct 4672940 CTTCTCGCAGCCCAGCTCGA-GCA-GCAAACGATCGGCCACAAACTCAATGTACTGCGAC 4672997
Query 794055 ATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTC 794114
|| || | ||||||||| | | |||| ||||| | || | | ||||| | |
Sbjct 4672998 ATCAGATCACAGTTCATGCCCAGCATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGC 4673057
Query 794115 TCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACGACGGCTTGTCG 794171
|||||| ||| || ||| |||||||| | | |||| || ||||||||| |
Sbjct 4673058 TCGATCAGGACCGCATCGCGGATGATCTCC---GTCACGCGCTCCTTCGACGGCTTCTGC 4673114
Query 794172 ACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216
|| || | || | | |||||||||||||||||| ||||| |||
Sbjct 4673115 ACCAGATACTTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCT 4673159
>seq7518
Length=5722304
Score = 111 bits (122), Expect = 2e-18
Identities = 240/351 (68%), Gaps = 15/351 (4%)
Strand=Plus/Minus
Query 653527 CAAGCGCGACAAGTCGACCATCCTGCGCACCAACGAGGCCGCCACGGTGCACCGCGTCGT 653586
|||||| ||| ||| || | |||||| | |||| ||| | || | | || |
Sbjct 4512795 CAAGCGAGACGGGTCAACGTTTTTGCGCAACTCCGAGACCGGTATCGTCGATCAGGTGAT 4512736
Query 653587 GGTGACGCGCAACGGCGACGGCGCCAACGCGGTCAAGATCGTCACCCGCGCCATGCGCCA 653646
| |||||| |||| |||| ||| ||| ||||||| ||| | |||| |
Sbjct 4512735 GCTGACGCTCAACAGCGAGGGCTACAAGTTCTGCAAGATCCGTGTGCGCTCGGTGCGT-A 4512677
Query 653647 GCCCG-AGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG----- 653700
|||| || | |||||||| | ||||||||||||| || || || || ||| |
Sbjct 4512676 TCCCGCAGATCGGCGACAAGTTTGCGTCGCGCCACGGACAGAAAGGTAC-GTGCGGTATA 4512618
Query 653701 CAGCGTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACAT 653760
||| | ||| | ||||| ||||||| || | | ||| |||| ||||| |||||
Sbjct 4512617 CAGTAT-CGCCAG---GAGGACATGCCGT--TCAC-GTGCGAGGGCATTACGCCGGACAT 4512565
Query 653761 CGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCT 653820
| |||| |||||||||||||||||||| || |||||||| || | |||| ||| | |
Sbjct 4512564 CATCATTAACCCGCACGCCATCCCGTCCCGTATGACCATTGGGCATTTGATCGAGTGCAT 4512505
Query 653821 CCTGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTT 653871
|| ||||||| ||| || | ||||| | | ||||||| ||| |||||
Sbjct 4512504 CCAGGGCAAGCTGGGCTCGAACAAGGGCGAAATCGGCGACGCCACGCCGTT 4512454
>seq7552
Length=2500597
Score = 107 bits (118), Expect = 3e-17
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| ||||| || || ||||| | ||| ||||||| ||||| ||||| || ||||| ||
Sbjct 1136287 CTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGA 1136346
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||| || || | | ||| | ||| ||||| | |||| || | ||
Sbjct 1136347 AATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCC 1136406
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|||||| ||||||| ||| || || || || |||| |||||||| ||||||||||||||
Sbjct 1136407 GATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTC 1136466
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGA 2073758
|| || | |||| |||||| ||||| |||||
Sbjct 1136467 AATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGA 1136505
>seq7517
Length=11427604
Score = 102 bits (112), Expect = 1e-15
Identities = 335/509 (66%), Gaps = 19/509 (4%)
Strand=Plus/Minus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
|| || || || ||| | |||| |||| |||||||||| | || || |||||
Sbjct 8048330 AGGTCGATTTTTGAGTCCTCCTCACTGGACGACATCTTGCCGCC---GGCCAGTCCCGGG 8048274
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGT-CGCG 2411501
| || ||| || | || || || |||||| ||| |||||| |||||||| | | ||
Sbjct 8048273 ATCATCGGATTCATAAGATGAATACGCTTGGCGTAACCCAGCTGCGGCAGGTATTTCTCG 8048214
Query 2411502 CGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 2411561
|| |||| || || |||||||| || ||| || ||||||||||| || | || |
Sbjct 8048213 -GCGAAGGTGAAAATTTTGCGCTGATCCACCCCACCGAACTGGGCGTCCACCTTCAGATA 8048155
Query 2411562 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTC 2411621
|| |||||| || ||||||| | |||||| | || | | | |||| | | ||
Sbjct 8048154 CTCCTCGTCCAGCGCCTGCAGGCCCGGGTACAGGATGCCCGACATCAGCGGAT---GCTC 8048098
Query 2411622 CA---TCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCACGCGCGCC 2411676
|| ||| ||||||| || | |||| || ||| ||||| | |||||| ||
Sbjct 8048097 CACCTGCTTCACCACCTCCGCTCCCGCCTTCTTGGCGTCGTGCTG--CGTCACGACCGAG 8048040
Query 2411677 GTCAGGCGCAAGAGGTCGAGCGTGTA-GGCGGCGCCATGCTGGTAATCGCTGCCGCGCAC 2411735
| || || | | || |||||||| | || || |||| || || |||||| |||
Sbjct 8048039 GACAACCGGTACACATCCAGCGTGTACTCCTTCGACA-GCTGATAGTCCGTGCCGCACAC 8047981
Query 2411736 AAATTCGAGACGATCCAGCGGGACGCC-AATGTGCTGGAGCATGGCCTTGATGGCAAACT 2411794
|| | || |||||||| || || | | | | ||||| |||||||| | ||
Sbjct 8047980 GAACTTCAGCTTGTCCAGCGGCACTCCGAGCGAGGT-AAGCATCGCCTTGATAACCGCCT 8047922
Query 2411795 CGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGG 2411854
|||| | | || | || || || |||||||| ||| ||||| || | ||
Sbjct 8047921 CGTAGTACTTGGTGCGTTCCTTGAGCAGCGACCACGGCGCCTTCATGTTGTCCAGATAGG 8047862
Query 2411855 CGTGCACGTCGGCAAAGAGGATCCTCACC 2411883
|||||| || ||||| |||||| | |||
Sbjct 8047861 CGTGCAGATCTGCAAACAGGATCGTTACC 8047833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915127233243719
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