Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq7521 149 4e-31
seq7535 145 5e-30
seq7517 114 8e-21
>seq7521
Length=12184106
Score = 149 bits (164), Expect = 4e-31
Identities = 163/215 (76%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| ||||| |||| ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 8321330 CAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATC 8321271
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| |||||||||||||| || ||||| ||| |||| | || ||||||||
Sbjct 8321270 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCTTCCTTGTC 8321211
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || || |||||| |||| ||| |||
Sbjct 8321210 CTGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 8321153
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||||||||| || || |||||||||||
Sbjct 8321152 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 8321118
Score = 118 bits (130), Expect = 7e-22
Identities = 143/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||||||||| ||||| || || |||| |||| ||||| ||||| ||||||||||
Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || ||||| ||| | || | || |||||||| | || ||| || || ||
Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCAC--ATT 9381273
Query 34908 CT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
|| |||| || | |||||| |||| || |||||||| || ||||| || || ||
Sbjct 9381274 CTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCAC 9381333
Query 34966 AAAGATCTGCATG 34978
|| |||||||||
Sbjct 9381334 GAAAATCTGCATG 9381346
>seq7535
Length=3646130
Score = 145 bits (160), Expect = 5e-30
Identities = 164/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| |||| ||||||||| |||||||||||||| ||| |||| ||||
Sbjct 876051 AGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 876110
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| |||||||| ||||||||||| || ||||| ||| |||| | |||||||||||
Sbjct 876111 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 876170
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCG-ATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || | ||| ||| || || | ||| |||
Sbjct 876171 TGGATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGG-CTCAACCTCGAGGGTGATG 876227
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| || || || || || || ||||||||
Sbjct 876228 GTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876262
Score = 141 bits (156), Expect = 6e-29
Identities = 163/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| || ||||||||| |||||||||||||| ||| |||| ||||
Sbjct 875823 AGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 875882
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| |||||||||||||||||||| || ||||| ||| |||| | |||||||||||
Sbjct 875883 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 875942
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCG-ATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || | ||| ||| || || | ||| |||
Sbjct 875943 TGGATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGG-CTCAACTTCCAGGGTGATG 875999
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| || || || || || || ||||||||
Sbjct 876000 GTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876034
Score = 116 bits (128), Expect = 2e-21
Identities = 97/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| ||| |||||||| |||||||||||||| ||| |||| ||||
Sbjct 876279 AGAACCAGATGAAGGGTCGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 876338
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| |||||||| ||||||||||| || ||||| ||| |||| | |||||||||||
Sbjct 876339 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTC 876397
>seq7517
Length=11427604
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || | | | || | ||
Sbjct 2898723 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCT 2898664
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 2898663 TCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 2898604
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 2898603 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 2898544
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || || ||||| || ||||||||||||
Sbjct 2898543 TTGCCAGTCAGCGTCTTCACGAAGATCTGCATG 2898511
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 2898495 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCT 2898436
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 2898435 TCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 2898376
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 2898375 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 2898316
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || |||||||||||
Sbjct 2898315 TTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 2898284
Score = 105 bits (116), Expect = 4e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| ||||| || | | | || | || ||||| ||||| ||||||||
Sbjct 2898931 CTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCCAGCTGCTTACCGGCGAA 2898872
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || ||||| ||| | || | ||||||||||| | || || || |||
Sbjct 2898871 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 2898812
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || | |||||| || | || |||||||| || || || ||||| ||
Sbjct 2898811 CTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 2898752
Query 34966 AAAGATCTGCATG 34978
||||||||||||
Sbjct 2898751 GAAGATCTGCATG 2898739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325651038142499
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |