Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq9485 127 2e-23 >seq9485 Length=8729 Score = 127 bits (140), Expect = 2e-23 Identities = 133/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 637123 ATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCA 637182 || ||||||| ||| || || || | || |||||||||||| | || |||||| | || Sbjct 6540 ATAGTCGATTTTTCCTCGCCTAACGTAGCGAAAGAAATGCATGTCGGTCATTTACGTTCG 6599 Query 637183 ACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACACGATGTTTATCG 637241 || || |||||||| || |||||| | | || ||| || | ||||||||||| ||| Sbjct 6600 ACCATCATTGGTGATTCAATTTGTCGATTTTTGGAATATCT-CGGACACGATGTGCTTCG 6658 Query 637242 TATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293 |||||| ||| | || || |||||||| ||||| ||||||||||||||| || Sbjct 6659 TATTAACCATATCGGAGACTGGGGAACGCAATTTGGTATGTTAATTGCTCAT 6710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740113863361746