Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_023688.1
Length=222006
Score E
Sequences producing significant alignments: (Bits) Value
seq236 116 5e-21
>seq236
Length=1144
Score = 116 bits (128), Expect = 5e-21
Identities = 256/378 (68%), Gaps = 8/378 (2%)
Strand=Plus/Minus
Query 32875 TTGAGCACAAGGATTTTTTCAACTTCAAGATGCCACATCGGATAATACAGAGTAGCAGCG 32934
|| ||||| || | |||| ||||| |||||||||||||| || ||| || |||||
Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084
Query 32935 CCACCACGTACACCGCCCTGTGAGCAGCTTTTTACCGCAGTCTGAAAGTATTTCCAGAAT 32994
|||||||| || |||||||| |||||| |||||| || ||||| || | || ||||
Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024
Query 32995 GGGATAATACCAGTATGACGAACCTCGCCAGAACGAATTCTAG--AGCCTTCAGCACGAA 33052
|| || || ||||| | | || ||| |||| || | | || | ||||| |
Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAA-TCGGGCTACCCAAC-GCACGGA 966
Query 33053 TAGCACCACCATTGATACCGATACCAGCTCTCTTGCTGATATAGTCAACGATAGAACTAG 33112
| || | ||||| ||||| || || | | | | || | || || | || |
Sbjct 965 TGCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTG 906
Query 33113 CGGTTGCGTTAATGCTATCGAGTTCATCACCACTTTCAATCTTGACGCATGAGCTAAACT 33172
||| || ||||| ||| || |||||||| ||| ||| || || ||||| ||||
Sbjct 905 AGGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACT 846
Query 33173 GACGGGTCGGAGTACGAACACCAGCCAGAATAGGAGTCGGAAGACTCAGCTTGCCAAG-- 33230
||||||| || ||||| || |||| || || || || || ||| | ||| |||
Sbjct 845 GACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTG--AAGGT 788
Query 33231 AGAAGTGACGTCATAAAA 33248
|||| || ||||||| ||
Sbjct 787 AGAAATGGCGTCATAGAA 770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710197787828560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |