Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_024121.1
Length=167266
Score E
Sequences producing significant alignments: (Bits) Value
seq236 138 1e-27
>seq236
Length=1144
Score = 138 bits (152), Expect = 1e-27
Identities = 265/391 (68%), Gaps = 10/391 (3%)
Strand=Plus/Minus
Query 139778 TTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAACGTCGCTGC 139837
|||||| || |||| | |||| ||||||| ||||| || || ||| ||||||| || ||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 139838 ACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGTGTTTCCAGAA 139897
||||||||| || || || ||||| |||||||| || || |||||||| || || ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 139898 AGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTTGAGCCTTCAGCTCGGAT 139957
||||| ||| || || |||| || | ||| || || |||||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965
Query 139958 TCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTACTTGACAATCGATGCTGC 140017
|| || |||||||||||||| || || |||| |||| ||| || ||||| | ||
Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905
Query 140018 TGAGTCGTTGATACTGTTAAGCGAATCATCAGACTCGATAACAACACACGAACTGAATTG 140077
| | | || || | || |||| || | ||||| | ||||| || ||||| ||
Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845
Query 140078 ACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCAATGAAACGCGCTTTTG--- 140134
||| | || ||||| | || | ||| || || || |||| |||| |||||
Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAA-----TTTTGAAG 790
Query 140135 --AGATACTGCATCATAGAAACGAATAACAT 140163
||| | || ||||||||||| | ||||
Sbjct 789 GTAGAAATGGCGTCATAGAAACGCTTTACAT 759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 535052824610160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |